Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789208
Identifier: 91789208
GI number: 91789208
Start: 3549224
End: 3550192
Strand: Direct
Name: 91789208
Synonym: Bpro_3352
Alternate gene names: NA
Gene position: 3549224-3550192 (Clockwise)
Preceding gene: 91789207
Following gene: 91789210
Centisome position: 68.25
GC content: 46.03
Gene sequence:
>969_bases ATGGATAAGTCCGATTTCGACCTTGCCGAGATCAATCTCGAGCAAGTTGTGAAGATTGACTACGATTTAGTTGTTTATGC GCTCGGCTATGAAAGCCGCGCAACCAAACTTCTTGAACTGGTGGGACAAAGGAAAAATCGAGCTGTTGCGTTCGGCTTCA ACTATGGTCAAGGCATCTCATTTGAAAAGAACACAGAGGCATTCTCTCGACAAGAAGTTAAGCAAGTTAAAGAGCTGAGC GATTCACAATTTCAAGCTGAGTTTGAACGTGAACTAAAGGATGCAATAACGAACAAATCAGATGGACATATCTTTAGACT GCTTGTCGATATTTCTTGCTTCAATCGCTTTCGCTTGGCGTCAGTTGTTTCATCGATAGCGAAATTCGCAGAGCATCGCC CTATTGCGGTAGATTTCTTCTACTCAATCGCGAAATTCAATGCTCCGCCAATAGGTCACATCACCAACTCGATCGTTGAT GCTGTTCATCCATCTTTTGCTGGATGGTCTCGTATTCCAGCAAATCCGACCGCAGCGGTCATCGGTTTAGGTTATGAACA AGGACAAGCGCTAGGGGTAGTCGAGTATCTTCAGGCAAATCCAGTGTGGGTTTTCCCCCCGCAATCTGGAGAGCTGCGCT ATTTCGACGCAGTCAATCAGGCTAATAGCCTCCTGTTAGATGAGCTGCCTAAGGGAAAAAATGTGCCATATAAAGTTGAG CAGCCCCTTGATACTTTTCGGGCAGTAGAAGGACTAACTAGGGGTCTACTACTTGACTACAACGTTGTCCTTGTTCCATT CGGGCCTAAAATTTTTGTGCTTATCGCTCTGCTCGCAGCGTGGCGGCACCGATCAATTGCTGTTTGGCGCGTAAGTCCAG GTACGGCCATTGAGCCAACTGAGCGAGAAGCAAGTGAGCATTACTCGCTAATTCGCGTTAATGCCAACTCAGGATTGTTA AAACTTTAA
Upstream 100 bases:
>100_bases AATCATATATCCGACCTGGTTCGAAATTCTTTGGAACTCAGCAAGCTAGGCGCACCTCTGCTGCATCACTTGCTGACGAA TCTCAGGAGGGGTTGTTTTA
Downstream 100 bases:
>100_bases AAAACTTTTCAAAAACTGAAGTGAACGGCTCTAAATTTACTTGCATGAAATAAATGAGTGTCTTACCTCCCGCTGTCTAA AGTGGTTGGTGCGCGCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MDKSDFDLAEINLEQVVKIDYDLVVYALGYESRATKLLELVGQRKNRAVAFGFNYGQGISFEKNTEAFSRQEVKQVKELS DSQFQAEFERELKDAITNKSDGHIFRLLVDISCFNRFRLASVVSSIAKFAEHRPIAVDFFYSIAKFNAPPIGHITNSIVD AVHPSFAGWSRIPANPTAAVIGLGYEQGQALGVVEYLQANPVWVFPPQSGELRYFDAVNQANSLLLDELPKGKNVPYKVE QPLDTFRAVEGLTRGLLLDYNVVLVPFGPKIFVLIALLAAWRHRSIAVWRVSPGTAIEPTEREASEHYSLIRVNANSGLL KL
Sequences:
>Translated_322_residues MDKSDFDLAEINLEQVVKIDYDLVVYALGYESRATKLLELVGQRKNRAVAFGFNYGQGISFEKNTEAFSRQEVKQVKELS DSQFQAEFERELKDAITNKSDGHIFRLLVDISCFNRFRLASVVSSIAKFAEHRPIAVDFFYSIAKFNAPPIGHITNSIVD AVHPSFAGWSRIPANPTAAVIGLGYEQGQALGVVEYLQANPVWVFPPQSGELRYFDAVNQANSLLLDELPKGKNVPYKVE QPLDTFRAVEGLTRGLLLDYNVVLVPFGPKIFVLIALLAAWRHRSIAVWRVSPGTAIEPTEREASEHYSLIRVNANSGLL KL >Mature_322_residues MDKSDFDLAEINLEQVVKIDYDLVVYALGYESRATKLLELVGQRKNRAVAFGFNYGQGISFEKNTEAFSRQEVKQVKELS DSQFQAEFERELKDAITNKSDGHIFRLLVDISCFNRFRLASVVSSIAKFAEHRPIAVDFFYSIAKFNAPPIGHITNSIVD AVHPSFAGWSRIPANPTAAVIGLGYEQGQALGVVEYLQANPVWVFPPQSGELRYFDAVNQANSLLLDELPKGKNVPYKVE QPLDTFRAVEGLTRGLLLDYNVVLVPFGPKIFVLIALLAAWRHRSIAVWRVSPGTAIEPTEREASEHYSLIRVNANSGLL KL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36004; Mature: 36004
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSDFDLAEINLEQVVKIDYDLVVYALGYESRATKLLELVGQRKNRAVAFGFNYGQGIS CCCCCCCHHHCCHHHHHEECCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCC FEKNTEAFSRQEVKQVKELSDSQFQAEFERELKDAITNKSDGHIFRLLVDISCFNRFRLA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHH SVVSSIAKFAEHRPIAVDFFYSIAKFNAPPIGHITNSIVDAVHPSFAGWSRIPANPTAAV HHHHHHHHHHHCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE IGLGYEQGQALGVVEYLQANPVWVFPPQSGELRYFDAVNQANSLLLDELPKGKNVPYKVE EECCHHCCCHHHHHHHHCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEECC QPLDTFRAVEGLTRGLLLDYNVVLVPFGPKIFVLIALLAAWRHRSIAVWRVSPGTAIEPT CHHHHHHHHHHHHHCEEEECCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC EREASEHYSLIRVNANSGLLKL HHHHHCCEEEEEEECCCCCEEC >Mature Secondary Structure MDKSDFDLAEINLEQVVKIDYDLVVYALGYESRATKLLELVGQRKNRAVAFGFNYGQGIS CCCCCCCHHHCCHHHHHEECCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCC FEKNTEAFSRQEVKQVKELSDSQFQAEFERELKDAITNKSDGHIFRLLVDISCFNRFRLA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHH SVVSSIAKFAEHRPIAVDFFYSIAKFNAPPIGHITNSIVDAVHPSFAGWSRIPANPTAAV HHHHHHHHHHHCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE IGLGYEQGQALGVVEYLQANPVWVFPPQSGELRYFDAVNQANSLLLDELPKGKNVPYKVE EECCHHCCCHHHHHHHHCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEECC QPLDTFRAVEGLTRGLLLDYNVVLVPFGPKIFVLIALLAAWRHRSIAVWRVSPGTAIEPT CHHHHHHHHHHHHHCEEEECCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC EREASEHYSLIRVNANSGLLKL HHHHHCCEEEEEEECCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA