Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789171
Identifier: 91789171
GI number: 91789171
Start: 3510046
End: 3510669
Strand: Direct
Name: 91789171
Synonym: Bpro_3314
Alternate gene names: NA
Gene position: 3510046-3510669 (Clockwise)
Preceding gene: 91789170
Following gene: 91789172
Centisome position: 67.5
GC content: 43.27
Gene sequence:
>624_bases ATGTTTCTGAAAGTTCTTGGTCGTATTCCACTTCTGCAGTGCTTGACTTACTTTCCGGCCCAGGCTCATAAGTCGGCAAG CAAGAAATTTTTCGCTCTACTATTTTTAACCAGTCTGCCGGTCATAGTTGCCGCCATGCTCGCGCCAATCCCGGAGGGTG ATGCCGGTGCCTTTGCAAAGCTTCTGATCAAGCTGAAAGACTCAATAACTGTATCTGAGCTTTTCGTTTATTCGGCAGCG TTCCTGACGCCGATTCTCTATCTTCACTATGAACGTTTCAGTGACGTACCCAGATCTCAAATTGCTGAGAAATTGGTAAA GGAAGCTAAGGGCATATTTAGTGGATACGGGCTAGTTGCATTACTGGCCTTGCTTTTTATCGTTTTCACCGCTATAGCAT TTAGCAGCACTAAGACCGACGCGGCGTACTTTCAAAAAAGTTTCCTGAACTACTACTTAGTCGAGTACTCACTTGAAGTC TATATTTTTTCGCTTTATTGTTTTTATCTGACCCTGCTAGATGGCGCAAATGCCGGTAACTTTGTCGTAGTAAATCGAAA AAAAGAAGATGACATAGAGATTGAATTCGCGGAGAGATTGAGGAAACGGGAATTAGAAAAATGA
Upstream 100 bases:
>100_bases GGATCTATGCTGGCATTGGAGAAATGTGTACCGTTGATAGAGCAAGCGTAATTGCCGGAAAAGCGTCTGCGCGCGGCAGG TACGAGGAGGTGATCATCAA
Downstream 100 bases:
>100_bases CGACCAAAATCAAATTGCCAGTGCTGTTGGTGCGGCAGCCGATAGGGGATTTTTATATCGCGTCGATCAGAGCACAGGAC CTTATCGATTTGTCTTACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MFLKVLGRIPLLQCLTYFPAQAHKSASKKFFALLFLTSLPVIVAAMLAPIPEGDAGAFAKLLIKLKDSITVSELFVYSAA FLTPILYLHYERFSDVPRSQIAEKLVKEAKGIFSGYGLVALLALLFIVFTAIAFSSTKTDAAYFQKSFLNYYLVEYSLEV YIFSLYCFYLTLLDGANAGNFVVVNRKKEDDIEIEFAERLRKRELEK
Sequences:
>Translated_207_residues MFLKVLGRIPLLQCLTYFPAQAHKSASKKFFALLFLTSLPVIVAAMLAPIPEGDAGAFAKLLIKLKDSITVSELFVYSAA FLTPILYLHYERFSDVPRSQIAEKLVKEAKGIFSGYGLVALLALLFIVFTAIAFSSTKTDAAYFQKSFLNYYLVEYSLEV YIFSLYCFYLTLLDGANAGNFVVVNRKKEDDIEIEFAERLRKRELEK >Mature_207_residues MFLKVLGRIPLLQCLTYFPAQAHKSASKKFFALLFLTSLPVIVAAMLAPIPEGDAGAFAKLLIKLKDSITVSELFVYSAA FLTPILYLHYERFSDVPRSQIAEKLVKEAKGIFSGYGLVALLALLFIVFTAIAFSSTKTDAAYFQKSFLNYYLVEYSLEV YIFSLYCFYLTLLDGANAGNFVVVNRKKEDDIEIEFAERLRKRELEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23392; Mature: 23392
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKVLGRIPLLQCLTYFPAQAHKSASKKFFALLFLTSLPVIVAAMLAPIPEGDAGAFAK CHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LLIKLKDSITVSELFVYSAAFLTPILYLHYERFSDVPRSQIAEKLVKEAKGIFSGYGLVA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH LLALLFIVFTAIAFSSTKTDAAYFQKSFLNYYLVEYSLEVYIFSLYCFYLTLLDGANAGN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FVVVNRKKEDDIEIEFAERLRKRELEK EEEEECCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MFLKVLGRIPLLQCLTYFPAQAHKSASKKFFALLFLTSLPVIVAAMLAPIPEGDAGAFAK CHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LLIKLKDSITVSELFVYSAAFLTPILYLHYERFSDVPRSQIAEKLVKEAKGIFSGYGLVA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH LLALLFIVFTAIAFSSTKTDAAYFQKSFLNYYLVEYSLEVYIFSLYCFYLTLLDGANAGN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FVVVNRKKEDDIEIEFAERLRKRELEK EEEEECCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA