Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is llaDCHIA [H]
Identifier: 91789170
GI number: 91789170
Start: 3509240
End: 3510055
Strand: Direct
Name: llaDCHIA [H]
Synonym: Bpro_3313
Alternate gene names: 91789170
Gene position: 3509240-3510055 (Clockwise)
Preceding gene: 91789169
Following gene: 91789171
Centisome position: 67.48
GC content: 47.18
Gene sequence:
>816_bases TTGCAGCCTGCAGCAACTACCGTAACTCCGTTTCTAAAGTGGGCTGGGGGGAAAAGGTGGCTTATCGAAAAGCATCCCTA TCTACTTGGTGGAAAGTTCACCAGATTCATTGAGCCCTTTGTTGGCGGGGGCGCGGTTTTCTTTAGCCTACAACCCGACT CTGCCATCCTATGTGACAAAAATGAAAAGTTGATTGAGGTTTATGCGACCATCAAATCAAACTGGCAACGCGTGGAAGAT CTTCTCGTGGAGCATCAGAACAAGCACTCGCCTGAATATTATTACGAGATAAGGTCCAAAGACTATAGGACGCCTGAGAC GCGTACGGCTCAACTAATTTATCTCAATAGGACTTGTTGGAATGGGTTGTACCGTGTCAATAAGAAAGGCGAATTCAATG TTCCGGTCGGAACAAAGCAGACCGTAATTCTTCAAACCGATAACTTTGAAGGTGTGGCATCAATTCTGAAACGGGCCGAG TTGATTTGTGGTGACTTCGACGTTGCTATGAGCAAAGCTGGGGAAAACGATTTTGTATTTGTTGACCCCCCATACACAGT GAAGCACAACTACAACGGCTTCGTAAAGTACAACGAAAATATATTCTCTTGGGACGACCAACTACGGCTGCGGGATGCTG TGAAAGCGGCCATTTCGCGCGGTGCAAAGGTTTTGGTCACGAACGCTTGCCATGAAAGCATTAAGCGGATCTATGCTGGC ATTGGAGAAATGTGTACCGTTGATAGAGCAAGCGTAATTGCCGGAAAAGCGTCTGCGCGCGGCAGGTACGAGGAGGTGAT CATCAAATGTTTCTGA
Upstream 100 bases:
>100_bases TGCTGATACCATCGCCAGTATCTTTCAATCGCCCGCCATACCCAGCATTGGTGCCATGCGAATGGTGTGGTGGAGTTAAA AAATTGTCCGGAGTATTCCC
Downstream 100 bases:
>100_bases AAGTTCTTGGTCGTATTCCACTTCTGCAGTGCTTGACTTACTTTCCGGCCCAGGCTCATAAGTCGGCAAGCAAGAAATTT TTCGCTCTACTATTTTTAAC
Product: DNA adenine methylase
Products: NA
Alternate protein names: M.LlaDCHI A; M.LlaDCHIA; Adenine-specific methyltransferase LlaDCHIA; M.LlaII A [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MQPAATTVTPFLKWAGGKRWLIEKHPYLLGGKFTRFIEPFVGGGAVFFSLQPDSAILCDKNEKLIEVYATIKSNWQRVED LLVEHQNKHSPEYYYEIRSKDYRTPETRTAQLIYLNRTCWNGLYRVNKKGEFNVPVGTKQTVILQTDNFEGVASILKRAE LICGDFDVAMSKAGENDFVFVDPPYTVKHNYNGFVKYNENIFSWDDQLRLRDAVKAAISRGAKVLVTNACHESIKRIYAG IGEMCTVDRASVIAGKASARGRYEEVIIKCF
Sequences:
>Translated_271_residues MQPAATTVTPFLKWAGGKRWLIEKHPYLLGGKFTRFIEPFVGGGAVFFSLQPDSAILCDKNEKLIEVYATIKSNWQRVED LLVEHQNKHSPEYYYEIRSKDYRTPETRTAQLIYLNRTCWNGLYRVNKKGEFNVPVGTKQTVILQTDNFEGVASILKRAE LICGDFDVAMSKAGENDFVFVDPPYTVKHNYNGFVKYNENIFSWDDQLRLRDAVKAAISRGAKVLVTNACHESIKRIYAG IGEMCTVDRASVIAGKASARGRYEEVIIKCF >Mature_271_residues MQPAATTVTPFLKWAGGKRWLIEKHPYLLGGKFTRFIEPFVGGGAVFFSLQPDSAILCDKNEKLIEVYATIKSNWQRVED LLVEHQNKHSPEYYYEIRSKDYRTPETRTAQLIYLNRTCWNGLYRVNKKGEFNVPVGTKQTVILQTDNFEGVASILKRAE LICGDFDVAMSKAGENDFVFVDPPYTVKHNYNGFVKYNENIFSWDDQLRLRDAVKAAISRGAKVLVTNACHESIKRIYAG IGEMCTVDRASVIAGKASARGRYEEVIIKCF
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the LlaDCHI endonuclease [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=265, Percent_Identity=29.811320754717, Blast_Score=111, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 30827; Mature: 30827
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPAATTVTPFLKWAGGKRWLIEKHPYLLGGKFTRFIEPFVGGGAVFFSLQPDSAILCDK CCCCCCHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHHHCCCCEEEEEECCCCEEEECC NEKLIEVYATIKSNWQRVEDLLVEHQNKHSPEYYYEIRSKDYRTPETRTAQLIYLNRTCW CCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECHHH NGLYRVNKKGEFNVPVGTKQTVILQTDNFEGVASILKRAELICGDFDVAMSKAGENDFVF CCEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEE VDPPYTVKHNYNGFVKYNENIFSWDDQLRLRDAVKAAISRGAKVLVTNACHESIKRIYAG ECCCEEEEECCCEEEEECCCEECCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHC IGEMCTVDRASVIAGKASARGRYEEVIIKCF CCCHHCCCCHHHEECCCCCCCCCCCEEEEEC >Mature Secondary Structure MQPAATTVTPFLKWAGGKRWLIEKHPYLLGGKFTRFIEPFVGGGAVFFSLQPDSAILCDK CCCCCCHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHHHCCCCEEEEEECCCCEEEECC NEKLIEVYATIKSNWQRVEDLLVEHQNKHSPEYYYEIRSKDYRTPETRTAQLIYLNRTCW CCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECHHH NGLYRVNKKGEFNVPVGTKQTVILQTDNFEGVASILKRAELICGDFDVAMSKAGENDFVF CCEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEE VDPPYTVKHNYNGFVKYNENIFSWDDQLRLRDAVKAAISRGAKVLVTNACHESIKRIYAG ECCCEEEEECCCEEEEECCCEECCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHC IGEMCTVDRASVIAGKASARGRYEEVIIKCF CCCHHCCCCHHHEECCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7793939; 11467810 [H]