Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789172
Identifier: 91789172
GI number: 91789172
Start: 3510666
End: 3511856
Strand: Direct
Name: 91789172
Synonym: Bpro_3315
Alternate gene names: NA
Gene position: 3510666-3511856 (Clockwise)
Preceding gene: 91789171
Following gene: 91789173
Centisome position: 67.51
GC content: 46.1
Gene sequence:
>1191_bases ATGACGACCAAAATCAAATTGCCAGTGCTGTTGGTGCGGCAGCCGATAGGGGATTTTTATATCGCGTCGATCAGAGCACA GGACCTTATCGATTTGTCTTACTCAGACGTTAGACGCCTTGTTCAAGATGAACGGGACTTGGAGCGCTACCTTGGTATTC AGAGACCACTTAGCAACAAACGCGTAAAAGAAATCCGCGAGTACATCGGCGGCGATGACGCGACATTCCCCACAGCGGTC ATCCTCGCAGTCGATGAAAAATGCGCTGAATTTGAGGCGACCGGCTTAAATTGCGGATTTCTTACCTTGAAAGAATTTGA ACCAGATCTCGACTCCGAAGAAGCCGTTCCTTACGATCGCATAGCGAAGGTCATAGATGGACAGCATCGAATTGCGGCAT TTTTGGATGATGAAAAAGAATGGCAGTATGGATACGGAAAAAACTTTGACATCAACGTTTCGATTTTTATTGGTGCCGAC GTTTCGGAGCAAGCAAACATTTTTGCCACCGTCAACCTCGCCCAGACAAAGGTTAGCAAGAACCTTGTTTACGATCTAAC AGAACTAGCAAAAACGCCTAGTCCTCACAAGACATGTCACAACGTAGCAGTTGCCCTCGATCGACAACGCTTAAGTCCAC TTTACAAAAGGATAAAGCGGCTTGGCACCGCAACACCAGGTCGAAGTAAAGAACCGTTAACCCAAGCTTCATTTGTTGAA TCGTTGGTTAAATTCATATCTATTAATCCAGGAAAAGATCGGAATGCGCTCCTCTCTGGAATCAAGATCGACAGAGCCTC TGCAGCAGAGCTTCAAAAATGTCCTTTTAGGAACCTCTTCCTTGATGGCCGGGAGGTAGACATCATTGAAATTATCTACA ACTACTTCAAAGCAATTGAAGAGAAGTGGCCACGGTCATGGGGGGAGCCAGACAGAGTCGGGAATTTGTTGCCTCGCTCC AATGCTTTTAAGGCGTTTATGATTTATTTGCGGGAAGATGTTTACCCCGCGTTGGTTCAAGGTAACTTTGGCGCTATTCC GACAACCGAAGATTTTAGAAAGTCGCTTTCCCACATTGAAGCCACGGATACCGACTTCACCAAACGCAACTTTGCACCTG GCAGCGGTGGTCAATCAACATTCTTGAAGATGTTGCGTGGACAAATCAATCTTTATGACATGCTGGAATAG
Upstream 100 bases:
>100_bases ATGGCGCAAATGCCGGTAACTTTGTCGTAGTAAATCGAAAAAAAGAAGATGACATAGAGATTGAATTCGCGGAGAGATTG AGGAAACGGGAATTAGAAAA
Downstream 100 bases:
>100_bases TCGCCCAAGGCAAATAGGAACTTTATAAATTTGACACTACATCCTCATATAGGGCATGTTAGCCTGGGCAACTAGGGTGG CACATCATGATGCATAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Dgqhr Domain; Dgqhr Domain Containing Protein; DGQHR Domain-Containing Protein
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTTKIKLPVLLVRQPIGDFYIASIRAQDLIDLSYSDVRRLVQDERDLERYLGIQRPLSNKRVKEIREYIGGDDATFPTAV ILAVDEKCAEFEATGLNCGFLTLKEFEPDLDSEEAVPYDRIAKVIDGQHRIAAFLDDEKEWQYGYGKNFDINVSIFIGAD VSEQANIFATVNLAQTKVSKNLVYDLTELAKTPSPHKTCHNVAVALDRQRLSPLYKRIKRLGTATPGRSKEPLTQASFVE SLVKFISINPGKDRNALLSGIKIDRASAAELQKCPFRNLFLDGREVDIIEIIYNYFKAIEEKWPRSWGEPDRVGNLLPRS NAFKAFMIYLREDVYPALVQGNFGAIPTTEDFRKSLSHIEATDTDFTKRNFAPGSGGQSTFLKMLRGQINLYDMLE
Sequences:
>Translated_396_residues MTTKIKLPVLLVRQPIGDFYIASIRAQDLIDLSYSDVRRLVQDERDLERYLGIQRPLSNKRVKEIREYIGGDDATFPTAV ILAVDEKCAEFEATGLNCGFLTLKEFEPDLDSEEAVPYDRIAKVIDGQHRIAAFLDDEKEWQYGYGKNFDINVSIFIGAD VSEQANIFATVNLAQTKVSKNLVYDLTELAKTPSPHKTCHNVAVALDRQRLSPLYKRIKRLGTATPGRSKEPLTQASFVE SLVKFISINPGKDRNALLSGIKIDRASAAELQKCPFRNLFLDGREVDIIEIIYNYFKAIEEKWPRSWGEPDRVGNLLPRS NAFKAFMIYLREDVYPALVQGNFGAIPTTEDFRKSLSHIEATDTDFTKRNFAPGSGGQSTFLKMLRGQINLYDMLE >Mature_395_residues TTKIKLPVLLVRQPIGDFYIASIRAQDLIDLSYSDVRRLVQDERDLERYLGIQRPLSNKRVKEIREYIGGDDATFPTAVI LAVDEKCAEFEATGLNCGFLTLKEFEPDLDSEEAVPYDRIAKVIDGQHRIAAFLDDEKEWQYGYGKNFDINVSIFIGADV SEQANIFATVNLAQTKVSKNLVYDLTELAKTPSPHKTCHNVAVALDRQRLSPLYKRIKRLGTATPGRSKEPLTQASFVES LVKFISINPGKDRNALLSGIKIDRASAAELQKCPFRNLFLDGREVDIIEIIYNYFKAIEEKWPRSWGEPDRVGNLLPRSN AFKAFMIYLREDVYPALVQGNFGAIPTTEDFRKSLSHIEATDTDFTKRNFAPGSGGQSTFLKMLRGQINLYDMLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44833; Mature: 44701
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKIKLPVLLVRQPIGDFYIASIRAQDLIDLSYSDVRRLVQDERDLERYLGIQRPLSNK CCCEEECCHHEECCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH RVKEIREYIGGDDATFPTAVILAVDEKCAEFEATGLNCGFLTLKEFEPDLDSEEAVPYDR HHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEHHCCCCCCCCCCCCCHHH IAKVIDGQHRIAAFLDDEKEWQYGYGKNFDINVSIFIGADVSEQANIFATVNLAQTKVSK HHHHHCCCHHEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEHHHHHHHH NLVYDLTELAKTPSPHKTCHNVAVALDRQRLSPLYKRIKRLGTATPGRSKEPLTQASFVE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH SLVKFISINPGKDRNALLSGIKIDRASAAELQKCPFRNLFLDGREVDIIEIIYNYFKAIE HHHHHHCCCCCCCHHHHHHCCEECCCCHHHHHHCCCHHHEECCCCCHHHHHHHHHHHHHH EKWPRSWGEPDRVGNLLPRSNAFKAFMIYLREDVYPALVQGNFGAIPTTEDFRKSLSHIE HHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCC ATDTDFTKRNFAPGSGGQSTFLKMLRGQINLYDMLE CCCCCCHHCCCCCCCCCHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure TTKIKLPVLLVRQPIGDFYIASIRAQDLIDLSYSDVRRLVQDERDLERYLGIQRPLSNK CCEEECCHHEECCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH RVKEIREYIGGDDATFPTAVILAVDEKCAEFEATGLNCGFLTLKEFEPDLDSEEAVPYDR HHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEHHCCCCCCCCCCCCCHHH IAKVIDGQHRIAAFLDDEKEWQYGYGKNFDINVSIFIGADVSEQANIFATVNLAQTKVSK HHHHHCCCHHEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEHHHHHHHH NLVYDLTELAKTPSPHKTCHNVAVALDRQRLSPLYKRIKRLGTATPGRSKEPLTQASFVE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH SLVKFISINPGKDRNALLSGIKIDRASAAELQKCPFRNLFLDGREVDIIEIIYNYFKAIE HHHHHHCCCCCCCHHHHHHCCEECCCCHHHHHHCCCHHHEECCCCCHHHHHHHHHHHHHH EKWPRSWGEPDRVGNLLPRSNAFKAFMIYLREDVYPALVQGNFGAIPTTEDFRKSLSHIE HHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCC ATDTDFTKRNFAPGSGGQSTFLKMLRGQINLYDMLE CCCCCCHHCCCCCCCCCHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA