Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789039
Identifier: 91789039
GI number: 91789039
Start: 3362921
End: 3363406
Strand: Reverse
Name: 91789039
Synonym: Bpro_3179
Alternate gene names: NA
Gene position: 3363406-3362921 (Counterclockwise)
Preceding gene: 91789040
Following gene: 91789038
Centisome position: 64.68
GC content: 60.91
Gene sequence:
>486_bases GTGAGCTGCTTGATACACCCCTCCGACACCCCTCCTGATGGCGATTTCGCGCGGTACGTCGAACGCTTGACCAGCGGAAA TATTTCAGCCGGCGCGCGCCCGGACATGTTCAAGCCAGAGTCGGCCGGGCAGGCGAGTGCGCCGTTTTCCCCGAGCTCCG GCATACCCTCTGTCAAGGCAGCCCTGGAACCCTTTGCAGGAATTCCGTTCCTCACTCATTTGAAGTGGGCGCTTGTGGCG TGGATAGGAACCCAGGTGCTGGCCAGGGTACTGCCCGGAGCAGGCTTTCTGTTTATTCCCTTCCTGCTGGCCTATGCTGC GTGGGTCGTGTTCAGGGTTGGCGCTCCCTCCCTGCGTGCCTCGGCCAAACGTCTTGCAGACCTGGCAGATTCCGCCGCAA GAACCGCCACCGCAAGAGCTGCCGCAACAGGCGCTGCCGAAATATTCTCCCATCCCCAACAAGCCGAACGCAAACACAAG TCATGA
Upstream 100 bases:
>100_bases GCACCGAGGTGGCCCGGGCGTCCAAGCTGTCGCTGGCACGCCGGCTGGTTCAGGAAATCGCTGCCAGGCTGGCGGCGCCG GCCGCTTCGACCCGGAAAGG
Downstream 100 bases:
>100_bases AAATCGACGTCAAGATTCTGGACCCCCGCCTTCAGGGCAATCTTCCTCACTACGCCACGCCCGGCAGCGCCGGCCTGGAC TTGCGCGCCTGCCTGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSCLIHPSDTPPDGDFARYVERLTSGNISAGARPDMFKPESAGQASAPFSPSSGIPSVKAALEPFAGIPFLTHLKWALVA WIGTQVLARVLPGAGFLFIPFLLAYAAWVVFRVGAPSLRASAKRLADLADSAARTATARAAATGAAEIFSHPQQAERKHK S
Sequences:
>Translated_161_residues MSCLIHPSDTPPDGDFARYVERLTSGNISAGARPDMFKPESAGQASAPFSPSSGIPSVKAALEPFAGIPFLTHLKWALVA WIGTQVLARVLPGAGFLFIPFLLAYAAWVVFRVGAPSLRASAKRLADLADSAARTATARAAATGAAEIFSHPQQAERKHK S >Mature_160_residues SCLIHPSDTPPDGDFARYVERLTSGNISAGARPDMFKPESAGQASAPFSPSSGIPSVKAALEPFAGIPFLTHLKWALVAW IGTQVLARVLPGAGFLFIPFLLAYAAWVVFRVGAPSLRASAKRLADLADSAARTATARAAATGAAEIFSHPQQAERKHKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16957; Mature: 16825
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCLIHPSDTPPDGDFARYVERLTSGNISAGARPDMFKPESAGQASAPFSPSSGIPSVKA CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ALEPFAGIPFLTHLKWALVAWIGTQVLARVLPGAGFLFIPFLLAYAAWVVFRVGAPSLRA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH SAKRLADLADSAARTATARAAATGAAEIFSHPQQAERKHKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure SCLIHPSDTPPDGDFARYVERLTSGNISAGARPDMFKPESAGQASAPFSPSSGIPSVKA CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ALEPFAGIPFLTHLKWALVAWIGTQVLARVLPGAGFLFIPFLLAYAAWVVFRVGAPSLRA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH SAKRLADLADSAARTATARAAATGAAEIFSHPQQAERKHKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA