Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is dut [H]
Identifier: 91789038
GI number: 91789038
Start: 3362478
End: 3362924
Strand: Reverse
Name: dut [H]
Synonym: Bpro_3178
Alternate gene names: 91789038
Gene position: 3362924-3362478 (Counterclockwise)
Preceding gene: 91789039
Following gene: 91789037
Centisome position: 64.67
GC content: 61.97
Gene sequence:
>447_bases ATGAAAATCGACGTCAAGATTCTGGACCCCCGCCTTCAGGGCAATCTTCCTCACTACGCCACGCCCGGCAGCGCCGGCCT GGACTTGCGCGCCTGCCTGGATGCGCCGCTGACGCTGGGCGCCAATGCCTGGCAACTGGTGCCGACGGGCATCGCGATCC ACCTGTGTGATCCGGGCTATGCGGCGCTCATTTTGCCGCGCTCCGGATTGGGCCATAAACACGGCATCGTGCTGGGTAAT CTGGTGGGCCTGATCGACAGTGACTACCAGGGCCAGTTGATGGTGAGCGCATGGAATCGCAGTGATGTGCCCTTCACCAT CGAGCCCATGGAGCGTATCGCGCAACTGGTGGTCGTGCCGGTTGTGCAGGCGGAGTTCAATGTCGTCACCGAATTCCCCG CCAGCGAACGTGGCGAAGGTGGTTACGGGTCCACCGGCAAAAACTGA
Upstream 100 bases:
>100_bases TGGCAGATTCCGCCGCAAGAACCGCCACCGCAAGAGCTGCCGCAACAGGCGCTGCCGAAATATTCTCCCATCCCCAACAA GCCGAACGCAAACACAAGTC
Downstream 100 bases:
>100_bases GGGTCGAACGGACGGCCGCATCGCCCCGGGTTCGTCCGGCGTCAGGCTTTTCTTACGCCGCTGGGCAGCCCTCTCCCACG CCGAGTCAGCCTGGGGCCCC
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVPVVQAEFNVVTEFPASERGEGGYGSTGKN
Sequences:
>Translated_148_residues MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVPVVQAEFNVVTEFPASERGEGGYGSTGKN >Mature_148_residues MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVPVVQAEFNVVTEFPASERGEGGYGSTGKN
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=132, Percent_Identity=37.1212121212121, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI4503423, Length=132, Percent_Identity=37.1212121212121, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI70906441, Length=132, Percent_Identity=37.1212121212121, Blast_Score=71, Evalue=4e-13, Organism=Escherichia coli, GI1790071, Length=149, Percent_Identity=67.7852348993289, Blast_Score=206, Evalue=5e-55, Organism=Caenorhabditis elegans, GI71988561, Length=148, Percent_Identity=36.4864864864865, Blast_Score=86, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6319729, Length=145, Percent_Identity=35.8620689655172, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI24583610, Length=149, Percent_Identity=34.8993288590604, Blast_Score=79, Evalue=9e-16, Organism=Drosophila melanogaster, GI19921126, Length=149, Percent_Identity=34.8993288590604, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15754; Mature: 15754
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGY CEEEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCEECCCCCEEEEECCEEEEEECCCE AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVP EEEEEECCCCCCCCCEEEEHEEEECCCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHHE VVQAEFNVVTEFPASERGEGGYGSTGKN EECCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGY CEEEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCEECCCCCEEEEECCEEEEEECCCE AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVP EEEEEECCCCCCCCCEEEEHEEEECCCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHHE VVQAEFNVVTEFPASERGEGGYGSTGKN EECCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA