Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is dut [H]

Identifier: 91789038

GI number: 91789038

Start: 3362478

End: 3362924

Strand: Reverse

Name: dut [H]

Synonym: Bpro_3178

Alternate gene names: 91789038

Gene position: 3362924-3362478 (Counterclockwise)

Preceding gene: 91789039

Following gene: 91789037

Centisome position: 64.67

GC content: 61.97

Gene sequence:

>447_bases
ATGAAAATCGACGTCAAGATTCTGGACCCCCGCCTTCAGGGCAATCTTCCTCACTACGCCACGCCCGGCAGCGCCGGCCT
GGACTTGCGCGCCTGCCTGGATGCGCCGCTGACGCTGGGCGCCAATGCCTGGCAACTGGTGCCGACGGGCATCGCGATCC
ACCTGTGTGATCCGGGCTATGCGGCGCTCATTTTGCCGCGCTCCGGATTGGGCCATAAACACGGCATCGTGCTGGGTAAT
CTGGTGGGCCTGATCGACAGTGACTACCAGGGCCAGTTGATGGTGAGCGCATGGAATCGCAGTGATGTGCCCTTCACCAT
CGAGCCCATGGAGCGTATCGCGCAACTGGTGGTCGTGCCGGTTGTGCAGGCGGAGTTCAATGTCGTCACCGAATTCCCCG
CCAGCGAACGTGGCGAAGGTGGTTACGGGTCCACCGGCAAAAACTGA

Upstream 100 bases:

>100_bases
TGGCAGATTCCGCCGCAAGAACCGCCACCGCAAGAGCTGCCGCAACAGGCGCTGCCGAAATATTCTCCCATCCCCAACAA
GCCGAACGCAAACACAAGTC

Downstream 100 bases:

>100_bases
GGGTCGAACGGACGGCCGCATCGCCCCGGGTTCGTCCGGCGTCAGGCTTTTCTTACGCCGCTGGGCAGCCCTCTCCCACG
CCGAGTCAGCCTGGGGCCCC

Product: deoxyuridine 5'-triphosphate nucleotidohydrolase

Products: NA

Alternate protein names: dUTPase; dUTP pyrophosphatase [H]

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGYAALILPRSGLGHKHGIVLGN
LVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVPVVQAEFNVVTEFPASERGEGGYGSTGKN

Sequences:

>Translated_148_residues
MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGYAALILPRSGLGHKHGIVLGN
LVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVPVVQAEFNVVTEFPASERGEGGYGSTGKN
>Mature_148_residues
MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGYAALILPRSGLGHKHGIVLGN
LVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVPVVQAEFNVVTEFPASERGEGGYGSTGKN

Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]

COG id: COG0756

COG function: function code F; dUTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dUTPase family [H]

Homologues:

Organism=Homo sapiens, GI70906444, Length=132, Percent_Identity=37.1212121212121, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI4503423, Length=132, Percent_Identity=37.1212121212121, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI70906441, Length=132, Percent_Identity=37.1212121212121, Blast_Score=71, Evalue=4e-13,
Organism=Escherichia coli, GI1790071, Length=149, Percent_Identity=67.7852348993289, Blast_Score=206, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI71988561, Length=148, Percent_Identity=36.4864864864865, Blast_Score=86, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6319729, Length=145, Percent_Identity=35.8620689655172, Blast_Score=74, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24583610, Length=149, Percent_Identity=34.8993288590604, Blast_Score=79, Evalue=9e-16,
Organism=Drosophila melanogaster, GI19921126, Length=149, Percent_Identity=34.8993288590604, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008180
- InterPro:   IPR008181 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.6.1.23 [H]

Molecular weight: Translated: 15754; Mature: 15754

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGY
CEEEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCEECCCCCEEEEECCEEEEEECCCE
AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVP
EEEEEECCCCCCCCCEEEEHEEEECCCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHHE
VVQAEFNVVTEFPASERGEGGYGSTGKN
EECCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIDVKILDPRLQGNLPHYATPGSAGLDLRACLDAPLTLGANAWQLVPTGIAIHLCDPGY
CEEEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCEECCCCCEEEEECCEEEEEECCCE
AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSAWNRSDVPFTIEPMERIAQLVVVP
EEEEEECCCCCCCCCEEEEHEEEECCCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHHE
VVQAEFNVVTEFPASERGEGGYGSTGKN
EECCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA