Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789015
Identifier: 91789015
GI number: 91789015
Start: 3331195
End: 3332016
Strand: Reverse
Name: 91789015
Synonym: Bpro_3155
Alternate gene names: NA
Gene position: 3332016-3331195 (Counterclockwise)
Preceding gene: 91789016
Following gene: 91789011
Centisome position: 64.07
GC content: 63.38
Gene sequence:
>822_bases ATGAAACTGCACGTGAGGCATACGACCGACTACCGCTACACCGAACCCCTGCGCTACGCGTTGCAGACGCTTTGGCTGAC CCCGCAGTCCGGCCCGGCGCAAACGGTGTATTTCTGGAGCCTGGGTGCGCCCGAAAAGCTTTTTTCCCAGCTCGACGCCT TTGGCAATCCCATCCATTCCTACACCTTCGTCGGCCAGGAGGCTGACAACGTGCGCTGGAGCCTGGTCAATGCGGCCGGT GACGTTGAAACCCTGGGGGTGGCCGAGTTCACCGATGCGGCGAACCTGCCGCATCCGGACTTCTTCTTGCGGGCCACGCA TCTGGCCCAGCCAGACCCGGTGCTGGCTGAGTTCGGCCGCCGTTTTGTCACGACTTCCGCCATCCGGGGCCAGGCCGATT TGGGCATGCTGTTGGCCCTGAGCCAGGGTGTGGCAGGGGCGGTAAGCTATCAAAAAAATAGCACCAGCGTGACGACCACG GCGCTCGAGGCGTTCAAGGCCGGTGCAGGCGTGTGCCAGGATCAGGCGCACGTGATGGTGGCGATCTGCCGCGGCCTGGG CATTCCTGCGCGTTATGTGAGCGGTTATTTTTACGCGGCCAACGAGCCTGACCTGGCCAGCCATGCGTGGGTGGATGTGT GCCTGGACGTCGCCAGCCGGCGCTGGGTCAGCATCGATGTAACCCACAGCTGCCTGATTGACGAGCGCCATGTTCGGCTG GCCATGGGAACGGACTACAACGCCTGCCCGCCGGCCAAGGGTGTGCGGCAGGGCGGTGGCAAGGAAACCATGACGGTGGA CATCACGATCCAGCCCGTTTGA
Upstream 100 bases:
>100_bases TGGGGGCGATGGCCGCAGCGTCGGGCCGCCCCAAGCAAGGCCAGCCCCCTCGGGGGGCAGAGAGTTACGCGAAGCGAACG AACGTGGGGGCTCTTATTCC
Downstream 100 bases:
>100_bases ACGGCGCTACGCTGGCCTGTCGCCAGCAGGGCGCAGAACGCGGCAGGCATCCTCAACGCTTGAGCGCCTCCATCACCACA TGGAGGGTGATTTCGTCCCT
Product: transglutaminase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKLHVRHTTDYRYTEPLRYALQTLWLTPQSGPAQTVYFWSLGAPEKLFSQLDAFGNPIHSYTFVGQEADNVRWSLVNAAG DVETLGVAEFTDAANLPHPDFFLRATHLAQPDPVLAEFGRRFVTTSAIRGQADLGMLLALSQGVAGAVSYQKNSTSVTTT ALEAFKAGAGVCQDQAHVMVAICRGLGIPARYVSGYFYAANEPDLASHAWVDVCLDVASRRWVSIDVTHSCLIDERHVRL AMGTDYNACPPAKGVRQGGGKETMTVDITIQPV
Sequences:
>Translated_273_residues MKLHVRHTTDYRYTEPLRYALQTLWLTPQSGPAQTVYFWSLGAPEKLFSQLDAFGNPIHSYTFVGQEADNVRWSLVNAAG DVETLGVAEFTDAANLPHPDFFLRATHLAQPDPVLAEFGRRFVTTSAIRGQADLGMLLALSQGVAGAVSYQKNSTSVTTT ALEAFKAGAGVCQDQAHVMVAICRGLGIPARYVSGYFYAANEPDLASHAWVDVCLDVASRRWVSIDVTHSCLIDERHVRL AMGTDYNACPPAKGVRQGGGKETMTVDITIQPV >Mature_273_residues MKLHVRHTTDYRYTEPLRYALQTLWLTPQSGPAQTVYFWSLGAPEKLFSQLDAFGNPIHSYTFVGQEADNVRWSLVNAAG DVETLGVAEFTDAANLPHPDFFLRATHLAQPDPVLAEFGRRFVTTSAIRGQADLGMLLALSQGVAGAVSYQKNSTSVTTT ALEAFKAGAGVCQDQAHVMVAICRGLGIPARYVSGYFYAANEPDLASHAWVDVCLDVASRRWVSIDVTHSCLIDERHVRL AMGTDYNACPPAKGVRQGGGKETMTVDITIQPV
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2569c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 29747; Mature: 29747
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHVRHTTDYRYTEPLRYALQTLWLTPQSGPAQTVYFWSLGAPEKLFSQLDAFGNPIHS CEEEEEECCCCCCCHHHHHHHHHHEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHH YTFVGQEADNVRWSLVNAAGDVETLGVAEFTDAANLPHPDFFLRATHLAQPDPVLAEFGR EEEECCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCCCCHHEEEECCCCCCCHHHHHHCH RFVTTSAIRGQADLGMLLALSQGVAGAVSYQKNSTSVTTTALEAFKAGAGVCQDQAHVMV HHEEHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHH AICRGLGIPARYVSGYFYAANEPDLASHAWVDVCLDVASRRWVSIDVTHSCLIDERHVRL HHHHCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHEEECCCEEEE AMGTDYNACPPAKGVRQGGGKETMTVDITIQPV EECCCCCCCCCCCHHHCCCCCEEEEEEEEEECC >Mature Secondary Structure MKLHVRHTTDYRYTEPLRYALQTLWLTPQSGPAQTVYFWSLGAPEKLFSQLDAFGNPIHS CEEEEEECCCCCCCHHHHHHHHHHEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHH YTFVGQEADNVRWSLVNAAGDVETLGVAEFTDAANLPHPDFFLRATHLAQPDPVLAEFGR EEEECCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCCCCHHEEEECCCCCCCHHHHHHCH RFVTTSAIRGQADLGMLLALSQGVAGAVSYQKNSTSVTTTALEAFKAGAGVCQDQAHVMV HHEEHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHH AICRGLGIPARYVSGYFYAANEPDLASHAWVDVCLDVASRRWVSIDVTHSCLIDERHVRL HHHHCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHEEECCCEEEE AMGTDYNACPPAKGVRQGGGKETMTVDITIQPV EECCCCCCCCCCCHHHCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]