Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789011
Identifier: 91789011
GI number: 91789011
Start: 3328463
End: 3329053
Strand: Reverse
Name: 91789011
Synonym: Bpro_3151
Alternate gene names: NA
Gene position: 3329053-3328463 (Counterclockwise)
Preceding gene: 91789015
Following gene: 91789005
Centisome position: 64.02
GC content: 56.01
Gene sequence:
>591_bases ATGGGAGACTGCATCTTCGATTTCATAGTCGCAATACAAGACCTTTTCCCCAACCTTTTTCCCAAGTCTTGCCGCCATGA TGCGAACCGCCCCAACCGGACACCAAACATGGAAATTCTCGACCCTGCAACACTCCACGAGTACCTGGCCGCCGACGCCT TCGAGGAAATGTCGGCATTCGGCGCGCTGTCGCAGAGTTTTGTCGCGAAGCTGCTGGCCGACGGTGAAGTGCTGAAGTTG ACAGCCAATGAGACCCTCTACCGCAAGGGCGATACCGCCAATAGCTTCTTCGTGTTGCTAAAAGGTCAAATCACCGTTTA TGAGGATACCGACGGCGGCAAGGACATCATCCGAACTATGAACGCGGGAGAGAGTGTGGGCTTTCCGGCAATGATCGCGC TGCGACCGCGGCGCTTCAGTGGCGATGCCACCACCGATGACTGCATCGTGGTGAAAGTCTCGAGTCAGGTGTTTGCCGAC CTCTATGCATGGGACCCGCAGCAATTCGCCATTTTTTTCATGAGCCTGTCGCGCGATATGAGCCGTTTTCTGAGCGACAC CGCGGGCAGACCGGGAAAGCCCCAGGATTAG
Upstream 100 bases:
>100_bases TGGCTGTGCGGCGAGAGGCTATGCGGCAAGACTTGACACGCATGGGGAAAAGAGAGGTATCAGGGCAAATCCGACTTGTA CTTGCGCGTAGATTTGCAAA
Downstream 100 bases:
>100_bases CGAAGCGCGGTCCGTGCTTCGCCGCGCCGCTCCACTTTTGATCGCTTTTAATGCCCATTTCACAAGGGGGTGTTGCATTG CAAGACCTGACCCGGGGGCT
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MGDCIFDFIVAIQDLFPNLFPKSCRHDANRPNRTPNMEILDPATLHEYLAADAFEEMSAFGALSQSFVAKLLADGEVLKL TANETLYRKGDTANSFFVLLKGQITVYEDTDGGKDIIRTMNAGESVGFPAMIALRPRRFSGDATTDDCIVVKVSSQVFAD LYAWDPQQFAIFFMSLSRDMSRFLSDTAGRPGKPQD
Sequences:
>Translated_196_residues MGDCIFDFIVAIQDLFPNLFPKSCRHDANRPNRTPNMEILDPATLHEYLAADAFEEMSAFGALSQSFVAKLLADGEVLKL TANETLYRKGDTANSFFVLLKGQITVYEDTDGGKDIIRTMNAGESVGFPAMIALRPRRFSGDATTDDCIVVKVSSQVFAD LYAWDPQQFAIFFMSLSRDMSRFLSDTAGRPGKPQD >Mature_195_residues GDCIFDFIVAIQDLFPNLFPKSCRHDANRPNRTPNMEILDPATLHEYLAADAFEEMSAFGALSQSFVAKLLADGEVLKLT ANETLYRKGDTANSFFVLLKGQITVYEDTDGGKDIIRTMNAGESVGFPAMIALRPRRFSGDATTDDCIVVKVSSQVFADL YAWDPQQFAIFFMSLSRDMSRFLSDTAGRPGKPQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21741; Mature: 21610
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDCIFDFIVAIQDLFPNLFPKSCRHDANRPNRTPNMEILDPATLHEYLAADAFEEMSAF CCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH GALSQSFVAKLLADGEVLKLTANETLYRKGDTANSFFVLLKGQITVYEDTDGGKDIIRTM HHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEEEECEEEEEECCCCHHHHHHHH NAGESVGFPAMIALRPRRFSGDATTDDCIVVKVSSQVFADLYAWDPQQFAIFFMSLSRDM CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH SRFLSDTAGRPGKPQD HHHHHHHCCCCCCCCC >Mature Secondary Structure GDCIFDFIVAIQDLFPNLFPKSCRHDANRPNRTPNMEILDPATLHEYLAADAFEEMSAF CHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH GALSQSFVAKLLADGEVLKLTANETLYRKGDTANSFFVLLKGQITVYEDTDGGKDIIRTM HHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEEEECEEEEEECCCCHHHHHHHH NAGESVGFPAMIALRPRRFSGDATTDDCIVVKVSSQVFADLYAWDPQQFAIFFMSLSRDM CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH SRFLSDTAGRPGKPQD HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA