Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789016
Identifier: 91789016
GI number: 91789016
Start: 3332378
End: 3333340
Strand: Reverse
Name: 91789016
Synonym: Bpro_3156
Alternate gene names: NA
Gene position: 3333340-3332378 (Counterclockwise)
Preceding gene: 91789017
Following gene: 91789015
Centisome position: 64.1
GC content: 60.64
Gene sequence:
>963_bases ATGCTATCAAGAACTGCTGATCACCTTTTCTGGATGTCGCGCTACACCGAGCGCGCCGAGAATACCGCGCGCATGCTTGA CGTGAACTACCAGACCTCGCTGTTGCCCCAGTCCGCGGCGGTGGCGCAAGGCGGCTGGCAGAGCCTGCTGAGCATCAGCG AACTCAAGCCGGCCTATGCGGCCAGGTACGGCGACAGCATCAATCCGCGTGAAGTGATGGACTTCATGGTGCGCGACGAG AAAAATTCGTCAAGCATCATCTCGTGCCTGAAAAACGCCCGCGAAAACGCCCGCGCCGTGCGGGGCACTCTGACCACCGA AGTGTGGGAGACGCAAAACCAGACTTACCTGGAAATCATCCGCATGCTGCGGAGCAGTGACTTCGAGCGCGACCCGGGCC AGTTTTTTGAATGGGTCAAGTTCCGTTCGCATCTCTCGCGCGGCGTGACGGCGGGCACCATGCTGCAGGATGAGGCTTTT CATTTTCTGCGCCTGGGGACCTTCCTGGAGCGGGCCGACAACACCGCCCGGCTGGTGGATGTTAAGTTCCATGCGGTGGA GAATGATTTTCTGGGCGCAACCGGTGAGAAAGACCAAGAGTACGACTTCTACCACTGGAGCGCGATTTTGCGCAGCGTGT CCGGCTTTGAGGTGTACCGCAAGGTGTACCGCGACGTCATCAAGCCCGAGCGCGTGGCCGAGCTGCTGATCCTGCGGGCC GACATGCCGCGCTCCCTGCTGGCCTGCCTGAACGAGGTCATGAGCAATCTCGCCATGGTGACCAGCGACGCGTCCAGCGA AACGCAGCGCCGCGCCGGAAAATTGCGCGCCGATTTGCAATATGCCCGCATCGACGAAATCCTCGCGACCGGCCTGCATG CCTTCCTGACCCAGTTCCTGGACCGGGTCAACGAAATCGGCGCGCACATCAGCCGCGAATTTCTCGTTCCGGCGACCAAT TGA
Upstream 100 bases:
>100_bases AGGGCGGCGGCACGAAGGACACCTGGATATTGCAGGAAGGCCATGGCATGCCCATGCAGACGCAATCACAGTCACAGTCA ACGGTTGGAGGTGTTTGATC
Downstream 100 bases:
>100_bases AACAGCATGAGGTCACGGCGGCCGCAGCGCCGGGCCGCCCCAAGCAAGGCCAGCCCCCTCGGGGCTGGAGCCTGCGGCTC CAAACCTGCTTGAGCAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MLSRTADHLFWMSRYTERAENTARMLDVNYQTSLLPQSAAVAQGGWQSLLSISELKPAYAARYGDSINPREVMDFMVRDE KNSSSIISCLKNARENARAVRGTLTTEVWETQNQTYLEIIRMLRSSDFERDPGQFFEWVKFRSHLSRGVTAGTMLQDEAF HFLRLGTFLERADNTARLVDVKFHAVENDFLGATGEKDQEYDFYHWSAILRSVSGFEVYRKVYRDVIKPERVAELLILRA DMPRSLLACLNEVMSNLAMVTSDASSETQRRAGKLRADLQYARIDEILATGLHAFLTQFLDRVNEIGAHISREFLVPATN
Sequences:
>Translated_320_residues MLSRTADHLFWMSRYTERAENTARMLDVNYQTSLLPQSAAVAQGGWQSLLSISELKPAYAARYGDSINPREVMDFMVRDE KNSSSIISCLKNARENARAVRGTLTTEVWETQNQTYLEIIRMLRSSDFERDPGQFFEWVKFRSHLSRGVTAGTMLQDEAF HFLRLGTFLERADNTARLVDVKFHAVENDFLGATGEKDQEYDFYHWSAILRSVSGFEVYRKVYRDVIKPERVAELLILRA DMPRSLLACLNEVMSNLAMVTSDASSETQRRAGKLRADLQYARIDEILATGLHAFLTQFLDRVNEIGAHISREFLVPATN >Mature_320_residues MLSRTADHLFWMSRYTERAENTARMLDVNYQTSLLPQSAAVAQGGWQSLLSISELKPAYAARYGDSINPREVMDFMVRDE KNSSSIISCLKNARENARAVRGTLTTEVWETQNQTYLEIIRMLRSSDFERDPGQFFEWVKFRSHLSRGVTAGTMLQDEAF HFLRLGTFLERADNTARLVDVKFHAVENDFLGATGEKDQEYDFYHWSAILRSVSGFEVYRKVYRDVIKPERVAELLILRA DMPRSLLACLNEVMSNLAMVTSDASSETQRRAGKLRADLQYARIDEILATGLHAFLTQFLDRVNEIGAHISREFLVPATN
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36641; Mature: 36641
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRTADHLFWMSRYTERAENTARMLDVNYQTSLLPQSAAVAQGGWQSLLSISELKPAYA CCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHCCCHHHHHHHHHHHHHHHHHHCHHHH ARYGDSINPREVMDFMVRDEKNSSSIISCLKNARENARAVRGTLTTEVWETQNQTYLEII HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RMLRSSDFERDPGQFFEWVKFRSHLSRGVTAGTMLQDEAFHFLRLGTFLERADNTARLVD HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VKFHAVENDFLGATGEKDQEYDFYHWSAILRSVSGFEVYRKVYRDVIKPERVAELLILRA EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC DMPRSLLACLNEVMSNLAMVTSDASSETQRRAGKLRADLQYARIDEILATGLHAFLTQFL CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRVNEIGAHISREFLVPATN HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLSRTADHLFWMSRYTERAENTARMLDVNYQTSLLPQSAAVAQGGWQSLLSISELKPAYA CCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHCCCHHHHHHHHHHHHHHHHHHCHHHH ARYGDSINPREVMDFMVRDEKNSSSIISCLKNARENARAVRGTLTTEVWETQNQTYLEII HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RMLRSSDFERDPGQFFEWVKFRSHLSRGVTAGTMLQDEAFHFLRLGTFLERADNTARLVD HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VKFHAVENDFLGATGEKDQEYDFYHWSAILRSVSGFEVYRKVYRDVIKPERVAELLILRA EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC DMPRSLLACLNEVMSNLAMVTSDASSETQRRAGKLRADLQYARIDEILATGLHAFLTQFL CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRVNEIGAHISREFLVPATN HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA