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The map label for this gene is ylbK [H]

Identifier: 91788951

GI number: 91788951

Start: 3258709

End: 3259605

Strand: Reverse

Name: ylbK [H]

Synonym: Bpro_3091

Alternate gene names: 91788951

Gene position: 3259605-3258709 (Counterclockwise)

Preceding gene: 91788955

Following gene: 91788950

Centisome position: 62.68

GC content: 66.56

Gene sequence:

>897_bases
ATGGCGCTGGCTTGGGCCTTGGTGTTGCTGGCGGGGTGCGCTGCGCCACCCGCTCCACCGGTGCGATCCGCCCCATCCAC
GCCGACGGCCGAGGCCGTCCCGAAAAAGCCTTTGAAAATCGGCCTGGCGCTGGGTGGCGGTGCGGCGCGGGGCTTTGCCC
ATGTGGGCGTGATTGCGGTGCTTGAAGAGGCCGGGCTCAAGCCTCATTATGTGGTCGGCACCTCGGCTGGCAGCCTGGTC
GCCGCACTTTATGCCAGCGGTAGAACCAGTGCCCAACTGCAGCAGACCGCCTTGAACATGCAGGAGGTCGCCATCACCGA
CTGGATGCTGCCGATTGTGGGCCGGGGCATGTTTCGCGGCGAGGCCCTGGCACGGCATGTCAATGAATTGCTGGCGGGCC
GCCTGATTGAAGACATGCCCGTTCCGCTGGGCATTGTGGCTACCGACCTCAACAGCGGTCAGGCCGTGCTGTTCCAGCGC
GGCGACACCGGCACGGCGGTGCGGGCATCGAGCGCTGTTCCGGCAGTCTTCGTGCCGGTCAGGATCAATGGCCGGGAGTA
TGTCGATGGCGGCCTGGTCTCGCCGGTGCCGGTGCGTTTTGCGCGGCAAATGGGCGCCGACCTGGTGATTGCGGTCGATA
TCTCCAGCCCGCCGGAGGCCAACCCGGCCGGCGATACGCTGCAGATACTGCTGCAGACCTTTGCCATCATGGGCAAAAGC
ATCAACCAGTATGAACTGAAGGATGCCGATGTGGTGGTGCGGCCGTCCCTGGCCGGCCTGAAGAGCGCCGACTTCTCGGC
CCGGCAACGCGCTATCGATTTGGGTCGGGCCGCCATGCTCGCGGCGCTGCCCGCGCTGCGGGCCAAACTGGACGCCGGGG
CGGTGCCGGCGCATTGA

Upstream 100 bases:

>100_bases
ACAAACGCGAATTATTCGTAATTGCCTTGGCGTCGATGGCAAACCCCCCGGCTGCGCTGCTTCAGGTTGGCGAGGATGGA
GGGCCGTGTCAGGCAGGCGC

Downstream 100 bases:

>100_bases
GGACTGAGGGGCCGATACCGGGCGCTCTGCTGAAGGACGCGCGGGGCTTTCAGGGAAAGCGCGAGAGAGCTGTCCCTGCG
GTTGACGCAGATGGTTCAGG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MALAWALVLLAGCAAPPAPPVRSAPSTPTAEAVPKKPLKIGLALGGGAARGFAHVGVIAVLEEAGLKPHYVVGTSAGSLV
AALYASGRTSAQLQQTALNMQEVAITDWMLPIVGRGMFRGEALARHVNELLAGRLIEDMPVPLGIVATDLNSGQAVLFQR
GDTGTAVRASSAVPAVFVPVRINGREYVDGGLVSPVPVRFARQMGADLVIAVDISSPPEANPAGDTLQILLQTFAIMGKS
INQYELKDADVVVRPSLAGLKSADFSARQRAIDLGRAAMLAALPALRAKLDAGAVPAH

Sequences:

>Translated_298_residues
MALAWALVLLAGCAAPPAPPVRSAPSTPTAEAVPKKPLKIGLALGGGAARGFAHVGVIAVLEEAGLKPHYVVGTSAGSLV
AALYASGRTSAQLQQTALNMQEVAITDWMLPIVGRGMFRGEALARHVNELLAGRLIEDMPVPLGIVATDLNSGQAVLFQR
GDTGTAVRASSAVPAVFVPVRINGREYVDGGLVSPVPVRFARQMGADLVIAVDISSPPEANPAGDTLQILLQTFAIMGKS
INQYELKDADVVVRPSLAGLKSADFSARQRAIDLGRAAMLAALPALRAKLDAGAVPAH
>Mature_297_residues
ALAWALVLLAGCAAPPAPPVRSAPSTPTAEAVPKKPLKIGLALGGGAARGFAHVGVIAVLEEAGLKPHYVVGTSAGSLVA
ALYASGRTSAQLQQTALNMQEVAITDWMLPIVGRGMFRGEALARHVNELLAGRLIEDMPVPLGIVATDLNSGQAVLFQRG
DTGTAVRASSAVPAVFVPVRINGREYVDGGLVSPVPVRFARQMGADLVIAVDISSPPEANPAGDTLQILLQTFAIMGKSI
NQYELKDADVVVRPSLAGLKSADFSARQRAIDLGRAAMLAALPALRAKLDAGAVPAH

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=232, Percent_Identity=33.1896551724138, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI260656041, Length=232, Percent_Identity=33.1896551724138, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI116256487, Length=232, Percent_Identity=33.1896551724138, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI260656037, Length=232, Percent_Identity=33.1896551724138, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI260656043, Length=232, Percent_Identity=33.1896551724138, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI148727335, Length=249, Percent_Identity=32.1285140562249, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI148727290, Length=249, Percent_Identity=32.1285140562249, Blast_Score=96, Evalue=6e-20,
Organism=Escherichia coli, GI226510936, Length=180, Percent_Identity=40.5555555555556, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71997289, Length=251, Percent_Identity=26.6932270916335, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71997299, Length=251, Percent_Identity=26.6932270916335, Blast_Score=72, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323581, Length=196, Percent_Identity=30.1020408163265, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281376913, Length=184, Percent_Identity=30.9782608695652, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571388, Length=184, Percent_Identity=30.4347826086957, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 30721; Mature: 30590

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAWALVLLAGCAAPPAPPVRSAPSTPTAEAVPKKPLKIGLALGGGAARGFAHVGVIAV
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHH
LEEAGLKPHYVVGTSAGSLVAALYASGRTSAQLQQTALNMQEVAITDWMLPIVGRGMFRG
HHHCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EALARHVNELLAGRLIEDMPVPLGIVATDLNSGQAVLFQRGDTGTAVRASSAVPAVFVPV
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCEEEEEE
RINGREYVDGGLVSPVPVRFARQMGADLVIAVDISSPPEANPAGDTLQILLQTFAIMGKS
EECCCEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC
INQYELKDADVVVRPSLAGLKSADFSARQRAIDLGRAAMLAALPALRAKLDAGAVPAH
CCCEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ALAWALVLLAGCAAPPAPPVRSAPSTPTAEAVPKKPLKIGLALGGGAARGFAHVGVIAV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHH
LEEAGLKPHYVVGTSAGSLVAALYASGRTSAQLQQTALNMQEVAITDWMLPIVGRGMFRG
HHHCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EALARHVNELLAGRLIEDMPVPLGIVATDLNSGQAVLFQRGDTGTAVRASSAVPAVFVPV
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCEEEEEE
RINGREYVDGGLVSPVPVRFARQMGADLVIAVDISSPPEANPAGDTLQILLQTFAIMGKS
EECCCEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC
INQYELKDADVVVRPSLAGLKSADFSARQRAIDLGRAAMLAALPALRAKLDAGAVPAH
CCCEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]