Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788950
Identifier: 91788950
GI number: 91788950
Start: 3258108
End: 3258521
Strand: Reverse
Name: 91788950
Synonym: Bpro_3090
Alternate gene names: NA
Gene position: 3258521-3258108 (Counterclockwise)
Preceding gene: 91788951
Following gene: 91788949
Centisome position: 62.66
GC content: 59.42
Gene sequence:
>414_bases ATGGAATCAGGCATTAAACGCAAGCAGGGCGATTACACGCTGGCTTTTAAGCTGTCGGTGGTCGAGCAGGTAGAAAAAGG CGATCTCACGTACAAACAGGCCCAGCACCGCTACGGTATCCAGGGCCGCTCGACGGTGCTGGTGTGGCTGCGCAAGCACG GACGCCAGGCGTGGGGAGATGCGGCATCATCAAGGCCGACCATGCCGATATCCCCCAAATCACCCCGATCCGCATCAGAC GTGCCGCTCACGCCCGAGCAGAAGATCAAAGCGCTCGAAGTGCAGCTTCGCGAGGCGCGCGAGAAGGCCCAACTGTTCGA AGCCGTGCTCGATGTCCTGAAGAAGGACTACGGCGTGCGTGTCGTAAAAAAGCCTTTGGGCAAGTCCTCGCGCAAAAGCT CCTCCCGCAGTTGA
Upstream 100 bases:
>100_bases CAGATGGTTCAGGTGCCGGTTTCAGGCGACGGTTTCAGGTCCACCAGATGACCCGTCCTGAATAAGGTTGACACTTTTCT ATCCAGGAAAAGGCAAGTCA
Downstream 100 bases:
>100_bases GCGTCGCGAAGGCTTGCCGCCACTGGGGCGTCAGCCGCCAGGCCTACTACCAGCAGTTGCAGCATGACCGGCACCGCTGT GAGCGTGCGGACACCGTGAT
Product: ISPsy11, transposase OrfA
Products: NA
Alternate protein names: ISPsy11 Transposase OrfA; Cytoplasmic Protein; Transposase OrfA; ISVisp4 Transposase OrfA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MESGIKRKQGDYTLAFKLSVVEQVEKGDLTYKQAQHRYGIQGRSTVLVWLRKHGRQAWGDAASSRPTMPISPKSPRSASD VPLTPEQKIKALEVQLREAREKAQLFEAVLDVLKKDYGVRVVKKPLGKSSRKSSSRS
Sequences:
>Translated_137_residues MESGIKRKQGDYTLAFKLSVVEQVEKGDLTYKQAQHRYGIQGRSTVLVWLRKHGRQAWGDAASSRPTMPISPKSPRSASD VPLTPEQKIKALEVQLREAREKAQLFEAVLDVLKKDYGVRVVKKPLGKSSRKSSSRS >Mature_137_residues MESGIKRKQGDYTLAFKLSVVEQVEKGDLTYKQAQHRYGIQGRSTVLVWLRKHGRQAWGDAASSRPTMPISPKSPRSASD VPLTPEQKIKALEVQLREAREKAQLFEAVLDVLKKDYGVRVVKKPLGKSSRKSSSRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15392; Mature: 15392
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESGIKRKQGDYTLAFKLSVVEQVEKGDLTYKQAQHRYGIQGRSTVLVWLRKHGRQAWGD CCCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCC AASSRPTMPISPKSPRSASDVPLTPEQKIKALEVQLREAREKAQLFEAVLDVLKKDYGVR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VVKKPLGKSSRKSSSRS HHHHHCCCCCCCCCCCC >Mature Secondary Structure MESGIKRKQGDYTLAFKLSVVEQVEKGDLTYKQAQHRYGIQGRSTVLVWLRKHGRQAWGD CCCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCC AASSRPTMPISPKSPRSASDVPLTPEQKIKALEVQLREAREKAQLFEAVLDVLKKDYGVR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VVKKPLGKSSRKSSSRS HHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA