Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788955

Identifier: 91788955

GI number: 91788955

Start: 3264038

End: 3264946

Strand: Reverse

Name: 91788955

Synonym: Bpro_3095

Alternate gene names: NA

Gene position: 3264946-3264038 (Counterclockwise)

Preceding gene: 91788958

Following gene: 91788951

Centisome position: 62.78

GC content: 60.73

Gene sequence:

>909_bases
ATGCCCACCACCATGATGATCGGACCGCAGGCCACTTACGTACTCAGCCATCCCGGCGCCTTTGCGTTGCGGGTACTCAA
GGGCTTTCGCGCCAACCAGGGCCTGCTGCTGGCCGGGGCCGTGGCTTACTACGCCTTGCTGTCGATTGTTCCGTTGCTGA
TCTTGATGGCGATTGCACTGTCGCATGTGATTGACCAATCGGCACTGCTGGAAGCGCTGGGCCGCTACATCGGCTGGCTG
GCGCCGGGACAGTCCGAATTCATTGTCGGAGAGCTCGCCAATTTCCTGGCGCATCGTGAAGTCATGGGCTGGCTGTTGCT
GGCCACCATGCTGTTTTTCAGTTCACTGGCTTTTACCGTGCTTGAAAATGCGATGTCGGTGGTGTTTTTGCACCGCGTGG
TCATTCGGCGGCGCCATTTTCTGGTGTCTGCCGTGCTGCCCTACTGCTACATCCTGTGCCTGGGGCTAGGCCTGCTACTG
GTGACGCTGGTCTCGGGCAGCATGCAGGCGCTGGGCGAAAAAAGCGTGGAGTTTCTGGGCTACAGCTGGTCGCTCAGCGG
ATTCTCGGGTGTGTTGCTATACCTGCTCGGGCTGGCCGGCGAGATTTTTCTGCTGACATCGGTGTACATGGTGATGCCGG
TGGGCAGGCTGTCGCTGCGCCACGCGTTGATTGGCGGGGTCACGGCTGCGCTGCTTTGGGAGGTGACGCGCCATGCCTTG
GTCTGGTACTTTGGCACGCTGTCGCAGGTGGGCCTGGTGTATGGCTCACTGACCACCGCCATCGTGGTTTTGCTGAGCCT
GGAAATCGCCGCCACGCTGCTGTTGCTGGGCGCGCAGGTCATTTCCGAGTACGAACGCATCGGCACAGTCTTGGAAAACG
CCCCGGCCCAGCCCATGCGGATGGACTAG

Upstream 100 bases:

>100_bases
CTGCCCCCGAGAGGGGCGTTTTTCCCCAGGGGCGGCCGGTCGGAAAAAATATTGTGCAGCTACCATGCCCGCATGGCAGC
CGAAAACGGCAGGAGACCCC

Downstream 100 bases:

>100_bases
CCCGCACCCTTGCCTTTGAGGTGGCATCGGTCGCTGCCAAAACAATAGCTGCTTGCGCCCGCGCGGTAAGGGCGCAAGCT
ACTTTTGACGACTGGTGCGC

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MPTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIALSHVIDQSALLEALGRYIGWL
APGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTVLENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLL
VTLVSGSMQALGEKSVEFLGYSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHAL
VWYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMRMD

Sequences:

>Translated_302_residues
MPTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIALSHVIDQSALLEALGRYIGWL
APGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTVLENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLL
VTLVSGSMQALGEKSVEFLGYSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHAL
VWYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMRMD
>Mature_301_residues
PTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIALSHVIDQSALLEALGRYIGWLA
PGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTVLENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLLV
TLVSGSMQALGEKSVEFLGYSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHALV
WYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMRMD

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 32762; Mature: 32631

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIAL
CCCCEEECCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SHVIDQSALLEALGRYIGWLAPGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTV
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLLVTLVSGSMQALGEKSVEFLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MD
CC
>Mature Secondary Structure 
PTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIAL
CCCEEECCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SHVIDQSALLEALGRYIGWLAPGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTV
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLLVTLVSGSMQALGEKSVEFLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA