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The map label for this gene is pcaU [H]

Identifier: 91788851

GI number: 91788851

Start: 3148754

End: 3149596

Strand: Reverse

Name: pcaU [H]

Synonym: Bpro_2991

Alternate gene names: 91788851

Gene position: 3149596-3148754 (Counterclockwise)

Preceding gene: 91788854

Following gene: 91788839

Centisome position: 60.57

GC content: 67.02

Gene sequence:

>843_bases
ATGGTCGCTGCAAAAACCGTTTCAACTTCCCGGCGCTTCGAGATCGCCAAGGCCGACATGATCGAAGGCATGGCCAAGGG
CATGGCGGTGCTGGAGAGCTTTGACACCCAGCGCCAGCGCCTCAATGCCACGCTGGCGGCCGAGCGCGCCGGCATCACGC
GGGCGGCCGCGCGCCGCCATTTGCTGACGCTGACGCACCTGGGCTACCTTGAGACGGACGGCAGCTATTTCTGGCTGGCG
GCCAAGGTGCTGCGGTTTTCCGGCAGCTATCTGGCGACTGCGCGGCTGCCACGCGCCGTGCAACCCACCCTGAACCGGCT
GGCCGCCCAGACCCAGGAGTCGTTTTCAGTTGTGGTGCTGGACGGCGACGAGATTGTCATCATCGGGCGCAGCGGGTTTG
AGTGGAAGACGTTCGCCGACGGCAAGACCGCGCCGGCCCGGCTGCTGGCTTATGGCCTGCATCTGGGGGCGCGTTTGCCG
GCGCACGCGACGTCGACTGGCCGGGTACTGCTGGCGGCCAAGACCAAAAGCGAGTTGAACGCGTGGCTCAAGGCCAGGGC
CGAAGCCGGCAGCCTGGCCCGGCTGACGCTGCACACGACGACCGATCCGCGCAAGCTCCGGGCGCTGATTGACCAGGCGC
GTCTTGATGACTACTGCATCGCCAGTGAAGAGCATGAACTCGGCGTGCATGCATTGGCCGTGCCGCTGCGCGACATGCAG
GGGCGGACGGTGGCGGCGCTCAATGTGGTGTCGTCTCCGCAGCGGATGACGCCTGAGGCCTTGCGGCGCGACCTGCTGCC
CCTGCTGCTGGACGCTGCGCGAGAACTGCGTCCCCTGCTGTAG

Upstream 100 bases:

>100_bases
GTTGTCCTGGTCTCCAAGCGTAGGCTGACGGGCGTCGCACCGCTAGGGGCGGCAGGTCGCCATTGCACGATGTTTGGCGT
ACTTGTGCGATGATCGCGCA

Downstream 100 bases:

>100_bases
GGGTTCAGGCGGGCTGCGCTTCAAAACTCCTCGCCCGGCAGCGTGAAGAAGAATGTCGCCCCCTTGTCCGGCGCCGACTC
GGCCCAGATCCGGCCGCGGT

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MVAAKTVSTSRRFEIAKADMIEGMAKGMAVLESFDTQRQRLNATLAAERAGITRAAARRHLLTLTHLGYLETDGSYFWLA
AKVLRFSGSYLATARLPRAVQPTLNRLAAQTQESFSVVVLDGDEIVIIGRSGFEWKTFADGKTAPARLLAYGLHLGARLP
AHATSTGRVLLAAKTKSELNAWLKARAEAGSLARLTLHTTTDPRKLRALIDQARLDDYCIASEEHELGVHALAVPLRDMQ
GRTVAALNVVSSPQRMTPEALRRDLLPLLLDAARELRPLL

Sequences:

>Translated_280_residues
MVAAKTVSTSRRFEIAKADMIEGMAKGMAVLESFDTQRQRLNATLAAERAGITRAAARRHLLTLTHLGYLETDGSYFWLA
AKVLRFSGSYLATARLPRAVQPTLNRLAAQTQESFSVVVLDGDEIVIIGRSGFEWKTFADGKTAPARLLAYGLHLGARLP
AHATSTGRVLLAAKTKSELNAWLKARAEAGSLARLTLHTTTDPRKLRALIDQARLDDYCIASEEHELGVHALAVPLRDMQ
GRTVAALNVVSSPQRMTPEALRRDLLPLLLDAARELRPLL
>Mature_280_residues
MVAAKTVSTSRRFEIAKADMIEGMAKGMAVLESFDTQRQRLNATLAAERAGITRAAARRHLLTLTHLGYLETDGSYFWLA
AKVLRFSGSYLATARLPRAVQPTLNRLAAQTQESFSVVVLDGDEIVIIGRSGFEWKTFADGKTAPARLLAYGLHLGARLP
AHATSTGRVLLAAKTKSELNAWLKARAEAGSLARLTLHTTTDPRKLRALIDQARLDDYCIASEEHELGVHALAVPLRDMQ
GRTVAALNVVSSPQRMTPEALRRDLLPLLLDAARELRPLL

Specific function: Activates transcription of the pca operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=264, Percent_Identity=25.3787878787879, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786468, Length=239, Percent_Identity=27.1966527196653, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082359, Length=283, Percent_Identity=23.321554770318, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786715, Length=240, Percent_Identity=23.75, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012794
- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 30643; Mature: 30643

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAAKTVSTSRRFEIAKADMIEGMAKGMAVLESFDTQRQRLNATLAAERAGITRAAARRH
CCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LLTLTHLGYLETDGSYFWLAAKVLRFSGSYLATARLPRAVQPTLNRLAAQTQESFSVVVL
HHHHHHCCEEECCCCCHHHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHCCCCEEEEEE
DGDEIVIIGRSGFEWKTFADGKTAPARLLAYGLHLGARLPAHATSTGRVLLAAKTKSELN
CCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHH
AWLKARAEAGSLARLTLHTTTDPRKLRALIDQARLDDYCIASEEHELGVHALAVPLRDMQ
HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEHHHCC
GRTVAALNVVSSPQRMTPEALRRDLLPLLLDAARELRPLL
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVAAKTVSTSRRFEIAKADMIEGMAKGMAVLESFDTQRQRLNATLAAERAGITRAAARRH
CCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LLTLTHLGYLETDGSYFWLAAKVLRFSGSYLATARLPRAVQPTLNRLAAQTQESFSVVVL
HHHHHHCCEEECCCCCHHHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHCCCCEEEEEE
DGDEIVIIGRSGFEWKTFADGKTAPARLLAYGLHLGARLPAHATSTGRVLLAAKTKSELN
CCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHH
AWLKARAEAGSLARLTLHTTTDPRKLRALIDQARLDDYCIASEEHELGVHALAVPLRDMQ
HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEHHHCC
GRTVAALNVVSSPQRMTPEALRRDLLPLLLDAARELRPLL
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9515921 [H]