Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788839
Identifier: 91788839
GI number: 91788839
Start: 3135194
End: 3135463
Strand: Reverse
Name: 91788839
Synonym: Bpro_2979
Alternate gene names: NA
Gene position: 3135463-3135194 (Counterclockwise)
Preceding gene: 91788851
Following gene: 91788826
Centisome position: 60.29
GC content: 48.52
Gene sequence:
>270_bases GTGCCGTTCGTACAGGTCGATAACCTCTTGAATGGGTTCGTACGCTGTCTTGATGTGAACGGTTCCGTCAATAAAAATAA AAATAACCTTGAGTGGTCGTCCTCGATTGGTTGGGGCTACAAACCAAAGAGTGGCCGGGTCTGTTCGATGCTCTTCACGA TCATCCTCCAAGTAAAGCCCGCATTTGTTTTCAAAGCATTGCTCGACTTCTCGCAACGAAACGTTGTGCTTCTCCCGAAG CTTCTCCAGTACATCCGGAGACATCGCTAG
Upstream 100 bases:
>100_bases TGGCCTCGGTATTACCGAGAGCCCCGCTTTCCCATGCCTCTATCGTGCCGGGAATCCGTGCCTTTTCTTTCATTTCTTTC TCCTGGGTTGGCTATTTAGC
Downstream 100 bases:
>100_bases ATTCTTCATTTTAGGCATTGTATATACAAAAACAAGGCTTCAAACCTTGATTTTTTTAAACACTTGCTAGACGTATGCTA CTTGCCACAAGCCTCGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPFVQVDNLLNGFVRCLDVNGSVNKNKNNLEWSSSIGWGYKPKSGRVCSMLFTIILQVKPAFVFKALLDFSQRNVVLLPK LLQYIRRHR
Sequences:
>Translated_89_residues MPFVQVDNLLNGFVRCLDVNGSVNKNKNNLEWSSSIGWGYKPKSGRVCSMLFTIILQVKPAFVFKALLDFSQRNVVLLPK LLQYIRRHR >Mature_88_residues PFVQVDNLLNGFVRCLDVNGSVNKNKNNLEWSSSIGWGYKPKSGRVCSMLFTIILQVKPAFVFKALLDFSQRNVVLLPKL LQYIRRHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10268; Mature: 10137
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVQVDNLLNGFVRCLDVNGSVNKNKNNLEWSSSIGWGYKPKSGRVCSMLFTIILQVKP CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCH AFVFKALLDFSQRNVVLLPKLLQYIRRHR HHHHHHHHHHCCCCEEEHHHHHHHHHHCC >Mature Secondary Structure PFVQVDNLLNGFVRCLDVNGSVNKNKNNLEWSSSIGWGYKPKSGRVCSMLFTIILQVKP CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCH AFVFKALLDFSQRNVVLLPKLLQYIRRHR HHHHHHHHHHCCCCEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA