Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788854
Identifier: 91788854
GI number: 91788854
Start: 3152098
End: 3153009
Strand: Reverse
Name: 91788854
Synonym: Bpro_2994
Alternate gene names: NA
Gene position: 3153009-3152098 (Counterclockwise)
Preceding gene: 91788855
Following gene: 91788851
Centisome position: 60.63
GC content: 67.76
Gene sequence:
>912_bases ATGAAAACCCAAACATCGGCCACCCTGGCCTGGGGTGGCGTCCTGCTCGCGGGCGTCTTGTGGGGTGTGGGCGCTCTGGT CGCCCAGTCTGTGATGGCTAGCGGCATGGCGCCGTACAGCTTGTCTCTGGCGCGCTTTGCGCTGGGCCTGCCGCTACTGT GGTGGTGGCATCTGCGGCAGGCGGTGCCTGTGAGGAATGCAGGCAAAACATCGGGCGAATGGCGGCAATTGCCCTGGCGC GAACGGGCGCTGATTGTGGGCACGGGTCTGGCGATGGCCATGAATGTGACCAGCTGGTTTGCCGGCATCACCTACATCGG GGCAGCCTTGCCCACGGTGATTTCAATCTGCTGCGCACCGGTGATCGTCGCTGTGCTGTCCGTGTCACGCGGCTATGAGC GCGCCAGCGGGCGGCTGGTGGCGGCGCTGGCCCTGGCATTGGGTGGGGTCGGGCTGATCGTGATGCCTGCGGAGGGCCTG AGCCTGCCGAAGGACTACGCCGTGGGCCTCGCCTGGTCGTTTGCTTCAGCGGGCCTTTATTCCGTGGTGGTGCTGGGCAA TGCGCGCATGCCTGCGCATGTGCCGGCGGTCAGCGCTTCGGCCTGGAGCATGACGGTGGCTGCGCTGCTGATGCTGCTGC TGGCCAGCGCGCAAGGCCTGACCTGGCCGCGCGATACCACCGCCTGGCTGCAGGTGGGCTACACCGGCGTGTTCACCACC TCGATTGCCTACCTGGCATTTGCCTGGGGCGCACGCCGCCTGTCACCGACGGCGGCGGTGGTGGGCACGCTGGTTGAGCC GCTGGTGGCTGCGGTGGCTGCTGCGTGCTTGTTTTCCCAGCCGCTGACAGGGCAGCAGGGCACGGGGGCCTTGCTGCTGG GGGCGGCGATGGTGGTGCTGGCCTGGCGCTGA
Upstream 100 bases:
>100_bases GTTCACTATTGAACGGCGTGCGGCCTTGAGTTGACGCGCCTGCTCCATTGATCTGGCAACAAAGCCCTGCGGGCCGGCGC ACGGATGGAGAAATTTTTTC
Downstream 100 bases:
>100_bases GTGATACGCGAGGAGGCCGGTTTCATGTTGGCTTTTGCAAAGTGAAATCGGCCTCAAGCTCAATATTTTTTAGGCGTGTG GGCAACTACCAATTTGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKTQTSATLAWGGVLLAGVLWGVGALVAQSVMASGMAPYSLSLARFALGLPLLWWWHLRQAVPVRNAGKTSGEWRQLPWR ERALIVGTGLAMAMNVTSWFAGITYIGAALPTVISICCAPVIVAVLSVSRGYERASGRLVAALALALGGVGLIVMPAEGL SLPKDYAVGLAWSFASAGLYSVVVLGNARMPAHVPAVSASAWSMTVAALLMLLLASAQGLTWPRDTTAWLQVGYTGVFTT SIAYLAFAWGARRLSPTAAVVGTLVEPLVAAVAAACLFSQPLTGQQGTGALLLGAAMVVLAWR
Sequences:
>Translated_303_residues MKTQTSATLAWGGVLLAGVLWGVGALVAQSVMASGMAPYSLSLARFALGLPLLWWWHLRQAVPVRNAGKTSGEWRQLPWR ERALIVGTGLAMAMNVTSWFAGITYIGAALPTVISICCAPVIVAVLSVSRGYERASGRLVAALALALGGVGLIVMPAEGL SLPKDYAVGLAWSFASAGLYSVVVLGNARMPAHVPAVSASAWSMTVAALLMLLLASAQGLTWPRDTTAWLQVGYTGVFTT SIAYLAFAWGARRLSPTAAVVGTLVEPLVAAVAAACLFSQPLTGQQGTGALLLGAAMVVLAWR >Mature_303_residues MKTQTSATLAWGGVLLAGVLWGVGALVAQSVMASGMAPYSLSLARFALGLPLLWWWHLRQAVPVRNAGKTSGEWRQLPWR ERALIVGTGLAMAMNVTSWFAGITYIGAALPTVISICCAPVIVAVLSVSRGYERASGRLVAALALALGGVGLIVMPAEGL SLPKDYAVGLAWSFASAGLYSVVVLGNARMPAHVPAVSASAWSMTVAALLMLLLASAQGLTWPRDTTAWLQVGYTGVFTT SIAYLAFAWGARRLSPTAAVVGTLVEPLVAAVAAACLFSQPLTGQQGTGALLLGAAMVVLAWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31447; Mature: 31447
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTQTSATLAWGGVLLAGVLWGVGALVAQSVMASGMAPYSLSLARFALGLPLLWWWHLRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH AVPVRNAGKTSGEWRQLPWRERALIVGTGLAMAMNVTSWFAGITYIGAALPTVISICCAP HCCCCCCCCCCCCHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVAVLSVSRGYERASGRLVAALALALGGVGLIVMPAEGLSLPKDYAVGLAWSFASAGLY HHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCE SVVVLGNARMPAHVPAVSASAWSMTVAALLMLLLASAQGLTWPRDTTAWLQVGYTGVFTT EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHH SIAYLAFAWGARRLSPTAAVVGTLVEPLVAAVAAACLFSQPLTGQQGTGALLLGAAMVVL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AWR CCC >Mature Secondary Structure MKTQTSATLAWGGVLLAGVLWGVGALVAQSVMASGMAPYSLSLARFALGLPLLWWWHLRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH AVPVRNAGKTSGEWRQLPWRERALIVGTGLAMAMNVTSWFAGITYIGAALPTVISICCAP HCCCCCCCCCCCCHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVAVLSVSRGYERASGRLVAALALALGGVGLIVMPAEGLSLPKDYAVGLAWSFASAGLY HHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCE SVVVLGNARMPAHVPAVSASAWSMTVAALLMLLLASAQGLTWPRDTTAWLQVGYTGVFTT EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHH SIAYLAFAWGARRLSPTAAVVGTLVEPLVAAVAAACLFSQPLTGQQGTGALLLGAAMVVL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AWR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA