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The map label for this gene is lrpC [H]

Identifier: 91788671

GI number: 91788671

Start: 2953268

End: 2953762

Strand: Reverse

Name: lrpC [H]

Synonym: Bpro_2809

Alternate gene names: 91788671

Gene position: 2953762-2953268 (Counterclockwise)

Preceding gene: 91788679

Following gene: 91788669

Centisome position: 56.8

GC content: 60.2

Gene sequence:

>495_bases
ATGATGACAGAAACTGACGAATACGATCACTACGACAGCCGCATCCTGACCGAACTGCAGCGGGACGCCCGCATCACCAT
GGCGGAGCTGGGACGACGCGTCCATTTGAGTCAGCCCGCGGTGACTGAGCGCGTCCGCAAACTGGAGCTGGGCGGTGTGA
TCAGGGGCTACCGCGCCGAGGTCGACCTGGCGCGGTTGGGCTATGGGATTCGCGCCATCATGCGCGTGGCACGGGCCGAG
TACGCCCGGGTGGTCAAGCTGATTGAGCAGACGCCGGAGGTGATCAACGCCTACAACGTCACCGGAGAAGACAGCTGGGT
GCTGGAAATTGCGGTCATTGACGTTTCGCATCTGGATGCAGTCGTGACCAAATTCTGCATCCTGACCGAGACTTCTACCG
CGATTGTGCTCAACGCCCCTCGTGAGAACGCCATTGTGCTGCCTGCCCGCAGGGAAAACATCAAACCCGCGATCAACAAG
GTCACGGGGAAATGA

Upstream 100 bases:

>100_bases
CGGAGCTCATCCACGCCATCGTAAATTGCCAATAACGGCCAAGCCATGCAGAATTAAAGGTGAAGAACGGAGATCGCTTT
TAATTTAACGCTTGAAAAGC

Downstream 100 bases:

>100_bases
CAGGGCCAACGTGATGTGGCGGTGCAGGTTCAGGGCATCTGGGTCTACCCCGGTGGTGACTGGCTCTATGCCGACATGAC
GGCGTTGCTGTGATGCCGCC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MMTETDEYDHYDSRILTELQRDARITMAELGRRVHLSQPAVTERVRKLELGGVIRGYRAEVDLARLGYGIRAIMRVARAE
YARVVKLIEQTPEVINAYNVTGEDSWVLEIAVIDVSHLDAVVTKFCILTETSTAIVLNAPRENAIVLPARRENIKPAINK
VTGK

Sequences:

>Translated_164_residues
MMTETDEYDHYDSRILTELQRDARITMAELGRRVHLSQPAVTERVRKLELGGVIRGYRAEVDLARLGYGIRAIMRVARAE
YARVVKLIEQTPEVINAYNVTGEDSWVLEIAVIDVSHLDAVVTKFCILTETSTAIVLNAPRENAIVLPARRENIKPAINK
VTGK
>Mature_164_residues
MMTETDEYDHYDSRILTELQRDARITMAELGRRVHLSQPAVTERVRKLELGGVIRGYRAEVDLARLGYGIRAIMRVARAE
YARVVKLIEQTPEVINAYNVTGEDSWVLEIAVIDVSHLDAVVTKFCILTETSTAIVLNAPRENAIVLPARRENIKPAINK
VTGK

Specific function: Transcriptional regulator with a possible role in regulation of amino acid metabolism. Plays a role in the growth phase transition [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR000835
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18473; Mature: 18473

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTETDEYDHYDSRILTELQRDARITMAELGRRVHLSQPAVTERVRKLELGGVIRGYRAE
CCCCCCCCCHHHHHHHHHHHHCCCEEHHHCCCEECCCCCHHHHHHHHHHHCCHHCCHHCC
VDLARLGYGIRAIMRVARAEYARVVKLIEQTPEVINAYNVTGEDSWVLEIAVIDVSHLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEEEECHHHHHH
VVTKFCILTETSTAIVLNAPRENAIVLPARRENIKPAINKVTGK
HHHHHHHEECCCCEEEEECCCCCEEEECCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MMTETDEYDHYDSRILTELQRDARITMAELGRRVHLSQPAVTERVRKLELGGVIRGYRAE
CCCCCCCCCHHHHHHHHHHHHCCCEEHHHCCCEECCCCCHHHHHHHHHHHCCHHCCHHCC
VDLARLGYGIRAIMRVARAEYARVVKLIEQTPEVINAYNVTGEDSWVLEIAVIDVSHLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEEEECHHHHHH
VVTKFCILTETSTAIVLNAPRENAIVLPARRENIKPAINKVTGK
HHHHHHHEECCCCEEEEECCCCCEEEECCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9341680 [H]