Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is ilvG [H]
Identifier: 91788679
GI number: 91788679
Start: 2961907
End: 2963619
Strand: Reverse
Name: ilvG [H]
Synonym: Bpro_2817
Alternate gene names: 91788679
Gene position: 2963619-2961907 (Counterclockwise)
Preceding gene: 91788680
Following gene: 91788671
Centisome position: 56.99
GC content: 63.51
Gene sequence:
>1713_bases ATGACTACACAACTTGCGGGCCACCTTCTCGTTGACTGCCTGATTGCCCAGGGCGTTACCCATGCGTTTGGCGTTCCCGG TGAAAGCTACCTCGCCGTCCTTGATGGCTTGCATGCACGCCAGGGCCAGATTGAATTCATCACCTGCCGCCAGGAAGGCG GTGCTGCCTTCATGGCCGAGGCGCACGGCAAGCTCACCGGCCGGCCGGGCGTTTGCATGGTGACGCGCGGACCGGGTGCT ACCAACGCTTCCATCGGTGTCCACACCGCGTTTCAGGACTCGACGCCCATGGTGCTGCTGGTGGGCGATGTGGCCAGCGA CTGCCGCGACCGGGAAGCTTTTCAGGAGGTGGATTACGCCAGCTTTTTCGGGCCGAGCACCAAGGGCTTTGCCAAACGCG TGGAGCGCATCGACGATGCGGACCGCATTCCGGAGTATGTGGCGCGCGCCTTTGCGACGGCCGTGAACGGCCGGCCCGGC CCGGTCGTGCTGGTATTGCCTGAAGACATGCTGACGCAGATGACCGGCGCCCAGCCCTTGCCCCGCGTGGAGGCGGTCCA GGCCTGGAGCGACCCCGGTTCCGTGCGTACGCTGCGCGAGATGCTGCTCCAATCGCAGCGGCCGTTTGTCATTGCCGGAG GCGGCGGCTGGACGCCGCAGTCGGCGCAGGCACTGCAGCGCTTTGCCGAAAACTGGAAGCTGCCGGTGGGCAACGCCTTT CGTTTCCAGGACACGTTTGACAACCACCACCCGCAATATGCCGGTGACGTGGGCATCGGCCTGAACCCCAAACTGGCAGC GCGTATCAAGGCCAGCGACCTCATCATCGCCATCGGCCCGCGCCTGGGGGAAATGACGACCGGCAATTACACCTTGCTGG AGGCACCTCGGCCCCGGCAGAAGCTGGTGCACATCCACTCCAGCGCCGAAGAACTCAACCGCGTCTACCAGGCCGACCTG GCCATCAACGCCACCATGAATGCCGCTGCGCGCTCGCTGGAGGTGCTAACGGCACCAGCCGAGTTGCCCTGGGAGGCCTG GACCGCATCGGCCAACAACGATTACCTGGCCAACCTGCAAACCCAGGAAGGGCAAAAGCTGCCCGGCGATATCGACATGG CGGCCATCGTCGGCCTGTTGCAAAAGCATTTGCCGCAAGATGCGGTACTGACCAATGGCGCGGGCAACTTTGCCAGCTGG GTGCACCGGTTTTTCAAACACCACGGGCTGGTCAAAGGGAACAAGACGCAACTGGCGCCCACTGTGGGCGCCATGGGCTA TGGCGTGCCGGCCGGCATCGCGGCCAATATCGTCTCGGGCCGAACGGCCTTCACCATTGCCGGGGACGGTGACTTCCTGA TGAATGGCCAGGAGCTGGCGACAGCCGTTCAGCACGGCGCCAAAAGCATCATCGTGCTGCTCAACAACGGCATGTACGGC ACCATTCGCATGCACCAGGAAAAGACGTATCCGCAGCACGTGAGCGGCTCGCGCCTGAACAACCCGGACTTTGCCGCCCT GGCACGCGCCTACGGTTATGCGGGTGTTCGCATCACGCGGACCGCCGAATTTGAAGCCGAACTGCTGGCCGCGCTGGCGC GCAAGGAAGGCACGGTGATCGAGGTGACACTGGATCCTGAGGTCATCACCACGCGGGGCACGCTGTCATCGATTACCCAG GCTGCATTGACTCAGTCGCTGCAAAAATCATAG
Upstream 100 bases:
>100_bases CGACAGAGGCGAAGCGTCTCGCGAGACGCGGCCTGCAAGGCCTCGCGCAGTACACGAAGTGACAAGCGTGGGGGCAACAC TCCAGCGCACAATACGCCCC
Downstream 100 bases:
>100_bases CTATATGTTGAATGCCTAATCGAGGGCGGATTCAAGCTGAAAAGGCTTGAGGAAATGAAAAAGGCCGGGATAGCCCGGCC TTTTGTCTGGCACGCCAGCT
Product: thiamine pyrophosphate enzyme-like protein
Products: NA
Alternate protein names: AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit [H]
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MTTQLAGHLLVDCLIAQGVTHAFGVPGESYLAVLDGLHARQGQIEFITCRQEGGAAFMAEAHGKLTGRPGVCMVTRGPGA TNASIGVHTAFQDSTPMVLLVGDVASDCRDREAFQEVDYASFFGPSTKGFAKRVERIDDADRIPEYVARAFATAVNGRPG PVVLVLPEDMLTQMTGAQPLPRVEAVQAWSDPGSVRTLREMLLQSQRPFVIAGGGGWTPQSAQALQRFAENWKLPVGNAF RFQDTFDNHHPQYAGDVGIGLNPKLAARIKASDLIIAIGPRLGEMTTGNYTLLEAPRPRQKLVHIHSSAEELNRVYQADL AINATMNAAARSLEVLTAPAELPWEAWTASANNDYLANLQTQEGQKLPGDIDMAAIVGLLQKHLPQDAVLTNGAGNFASW VHRFFKHHGLVKGNKTQLAPTVGAMGYGVPAGIAANIVSGRTAFTIAGDGDFLMNGQELATAVQHGAKSIIVLLNNGMYG TIRMHQEKTYPQHVSGSRLNNPDFAALARAYGYAGVRITRTAEFEAELLAALARKEGTVIEVTLDPEVITTRGTLSSITQ AALTQSLQKS
Sequences:
>Translated_570_residues MTTQLAGHLLVDCLIAQGVTHAFGVPGESYLAVLDGLHARQGQIEFITCRQEGGAAFMAEAHGKLTGRPGVCMVTRGPGA TNASIGVHTAFQDSTPMVLLVGDVASDCRDREAFQEVDYASFFGPSTKGFAKRVERIDDADRIPEYVARAFATAVNGRPG PVVLVLPEDMLTQMTGAQPLPRVEAVQAWSDPGSVRTLREMLLQSQRPFVIAGGGGWTPQSAQALQRFAENWKLPVGNAF RFQDTFDNHHPQYAGDVGIGLNPKLAARIKASDLIIAIGPRLGEMTTGNYTLLEAPRPRQKLVHIHSSAEELNRVYQADL AINATMNAAARSLEVLTAPAELPWEAWTASANNDYLANLQTQEGQKLPGDIDMAAIVGLLQKHLPQDAVLTNGAGNFASW VHRFFKHHGLVKGNKTQLAPTVGAMGYGVPAGIAANIVSGRTAFTIAGDGDFLMNGQELATAVQHGAKSIIVLLNNGMYG TIRMHQEKTYPQHVSGSRLNNPDFAALARAYGYAGVRITRTAEFEAELLAALARKEGTVIEVTLDPEVITTRGTLSSITQ AALTQSLQKS >Mature_569_residues TTQLAGHLLVDCLIAQGVTHAFGVPGESYLAVLDGLHARQGQIEFITCRQEGGAAFMAEAHGKLTGRPGVCMVTRGPGAT NASIGVHTAFQDSTPMVLLVGDVASDCRDREAFQEVDYASFFGPSTKGFAKRVERIDDADRIPEYVARAFATAVNGRPGP VVLVLPEDMLTQMTGAQPLPRVEAVQAWSDPGSVRTLREMLLQSQRPFVIAGGGGWTPQSAQALQRFAENWKLPVGNAFR FQDTFDNHHPQYAGDVGIGLNPKLAARIKASDLIIAIGPRLGEMTTGNYTLLEAPRPRQKLVHIHSSAEELNRVYQADLA INATMNAAARSLEVLTAPAELPWEAWTASANNDYLANLQTQEGQKLPGDIDMAAIVGLLQKHLPQDAVLTNGAGNFASWV HRFFKHHGLVKGNKTQLAPTVGAMGYGVPAGIAANIVSGRTAFTIAGDGDFLMNGQELATAVQHGAKSIIVLLNNGMYGT IRMHQEKTYPQHVSGSRLNNPDFAALARAYGYAGVRITRTAEFEAELLAALARKEGTVIEVTLDPEVITTRGTLSSITQA ALTQSLQKS
Specific function: Catalyzes the first step in the biosynthesis of branched-chain amino acids [H]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=577, Percent_Identity=22.7036395147314, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI21361361, Length=529, Percent_Identity=24.1965973534972, Blast_Score=94, Evalue=5e-19, Organism=Escherichia coli, GI87081685, Length=566, Percent_Identity=31.2720848056537, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI1790104, Length=547, Percent_Identity=27.7879341864717, Blast_Score=186, Evalue=4e-48, Organism=Escherichia coli, GI1786717, Length=559, Percent_Identity=27.1914132379249, Blast_Score=152, Evalue=8e-38, Organism=Escherichia coli, GI1788716, Length=586, Percent_Identity=23.7201365187713, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1787096, Length=555, Percent_Identity=23.963963963964, Blast_Score=99, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17531301, Length=565, Percent_Identity=25.8407079646018, Blast_Score=106, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17531299, Length=574, Percent_Identity=25.7839721254355, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17542570, Length=552, Percent_Identity=23.1884057971014, Blast_Score=81, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323755, Length=577, Percent_Identity=27.0363951473137, Blast_Score=203, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6320816, Length=576, Percent_Identity=20.4861111111111, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323163, Length=551, Percent_Identity=21.0526315789474, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI19922626, Length=598, Percent_Identity=24.0802675585284, Blast_Score=121, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 61104; Mature: 60973
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQLAGHLLVDCLIAQGVTHAFGVPGESYLAVLDGLHARQGQIEFITCRQEGGAAFMAE CCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEE AHGKLTGRPGVCMVTRGPGATNASIGVHTAFQDSTPMVLLVGDVASDCRDREAFQEVDYA CCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHCCHH SFFGPSTKGFAKRVERIDDADRIPEYVARAFATAVNGRPGPVVLVLPEDMLTQMTGAQPL HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHCCCCCC PRVEAVQAWSDPGSVRTLREMLLQSQRPFVIAGGGGWTPQSAQALQRFAENWKLPVGNAF CCHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEE RFQDTFDNHHPQYAGDVGIGLNPKLAARIKASDLIIAIGPRLGEMTTGNYTLLEAPRPRQ EECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEECCCCHH KLVHIHSSAEELNRVYQADLAINATMNAAARSLEVLTAPAELPWEAWTASANNDYLANLQ HHEEHHCCHHHHHHHHHHHHEEECHHHHHHHHEEEEECCCCCCHHHEECCCCCCEEEECC TQEGQKLPGDIDMAAIVGLLQKHLPQDAVLTNGAGNFASWVHRFFKHHGLVKGNKTQLAP CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC TVGAMGYGVPAGIAANIVSGRTAFTIAGDGDFLMNGQELATAVQHGAKSIIVLLNNGMYG CHHHCCCCCCCHHHHHHCCCCEEEEEECCCCEEECHHHHHHHHHCCCCEEEEEEECCCEE TIRMHQEKTYPQHVSGSRLNNPDFAALARAYGYAGVRITRTAEFEAELLAALARKEGTVI EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCEE EVTLDPEVITTRGTLSSITQAALTQSLQKS EEEECCCEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TTQLAGHLLVDCLIAQGVTHAFGVPGESYLAVLDGLHARQGQIEFITCRQEGGAAFMAE CCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEE AHGKLTGRPGVCMVTRGPGATNASIGVHTAFQDSTPMVLLVGDVASDCRDREAFQEVDYA CCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHCCHH SFFGPSTKGFAKRVERIDDADRIPEYVARAFATAVNGRPGPVVLVLPEDMLTQMTGAQPL HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHCCCCCC PRVEAVQAWSDPGSVRTLREMLLQSQRPFVIAGGGGWTPQSAQALQRFAENWKLPVGNAF CCHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEE RFQDTFDNHHPQYAGDVGIGLNPKLAARIKASDLIIAIGPRLGEMTTGNYTLLEAPRPRQ EECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEECCCCHH KLVHIHSSAEELNRVYQADLAINATMNAAARSLEVLTAPAELPWEAWTASANNDYLANLQ HHEEHHCCHHHHHHHHHHHHEEECHHHHHHHHEEEEECCCCCCHHHEECCCCCCEEEECC TQEGQKLPGDIDMAAIVGLLQKHLPQDAVLTNGAGNFASWVHRFFKHHGLVKGNKTQLAP CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC TVGAMGYGVPAGIAANIVSGRTAFTIAGDGDFLMNGQELATAVQHGAKSIIVLLNNGMYG CHHHCCCCCCCHHHHHHCCCCEEEEEECCCCEEECHHHHHHHHHCCCCEEEEEEECCCEE TIRMHQEKTYPQHVSGSRLNNPDFAALARAYGYAGVRITRTAEFEAELLAALARKEGTVI EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCEE EVTLDPEVITTRGTLSSITQAALTQSLQKS EEEECCCEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3550695; 1379743; 9278503; 1995430; 6154938; 7015336; 3897211 [H]