Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yrbH [C]
Identifier: 91788620
GI number: 91788620
Start: 2902625
End: 2902999
Strand: Direct
Name: yrbH [C]
Synonym: Bpro_2758
Alternate gene names: 91788620
Gene position: 2902625-2902999 (Clockwise)
Preceding gene: 91788619
Following gene: 91788621
Centisome position: 55.82
GC content: 62.13
Gene sequence:
>375_bases ATGAGCAAAAAAATATCGTCATTGATGCACCGTGAAGTGTGCCTGGTCGGCCTGGACGACACGGCGCAATCCGTCGAGGC CCAGATGGTGGCCAAGGGCCTGTCATGGGTGCCGGTGGCCAATGCCGACGGCGTGGTCCTGGGCGTCATCAGCAGCGCGG ACCTGCTGCGCCTGCATGCCGAAGGCAAGCCCTTCCAGAAAGTCAGCGCCTGGCAGCTCTGCACCTACAAGCCGATCACC GTGCGCCCGGACGCCACCCTCAGCGAAGTCGCCAGCCTGATGGTCGCGATGAATATTCATCATGTGGTGGTGGCGGAGGG CACGCATATCAAGGGGGTCGTCTCCTCACTCGACTTCGTGCGCACCTTCGTGTAG
Upstream 100 bases:
>100_bases TCACGCGCGACGTGCTGGCCGTGGAAGCACGGCTGGGACGCGCGCCACGCAGCGCCGCGCCGGCGCGACATGAGCCGTCA TCGGCGGCCAGGAGCATGCC
Downstream 100 bases:
>100_bases GGGGCAGCAAGGCAGCTCCGGTGGCTCCGGGTGGCCTCAGGTAGCGCCGGCTTGCTCGAGGTGACTCCAGGCTTCTTCAT AATCACCCCATGAAGTCTTT
Product: signal-transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSKKISSLMHREVCLVGLDDTAQSVEAQMVAKGLSWVPVANADGVVLGVISSADLLRLHAEGKPFQKVSAWQLCTYKPIT VRPDATLSEVASLMVAMNIHHVVVAEGTHIKGVVSSLDFVRTFV
Sequences:
>Translated_124_residues MSKKISSLMHREVCLVGLDDTAQSVEAQMVAKGLSWVPVANADGVVLGVISSADLLRLHAEGKPFQKVSAWQLCTYKPIT VRPDATLSEVASLMVAMNIHHVVVAEGTHIKGVVSSLDFVRTFV >Mature_123_residues SKKISSLMHREVCLVGLDDTAQSVEAQMVAKGLSWVPVANADGVVLGVISSADLLRLHAEGKPFQKVSAWQLCTYKPITV RPDATLSEVASLMVAMNIHHVVVAEGTHIKGVVSSLDFVRTFV
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13341; Mature: 13210
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKISSLMHREVCLVGLDDTAQSVEAQMVAKGLSWVPVANADGVVLGVISSADLLRLHA CCHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCEEEEEEC EGKPFQKVSAWQLCTYKPITVRPDATLSEVASLMVAMNIHHVVVAEGTHIKGVVSSLDFV CCCCCCHHCCEEEEECCCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH RTFV HHCC >Mature Secondary Structure SKKISSLMHREVCLVGLDDTAQSVEAQMVAKGLSWVPVANADGVVLGVISSADLLRLHA CHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCEEEEEEC EGKPFQKVSAWQLCTYKPITVRPDATLSEVASLMVAMNIHHVVVAEGTHIKGVVSSLDFV CCCCCCHHCCEEEEECCCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH RTFV HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA