Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788621
Identifier: 91788621
GI number: 91788621
Start: 2903089
End: 2903586
Strand: Direct
Name: 91788621
Synonym: Bpro_2759
Alternate gene names: NA
Gene position: 2903089-2903586 (Clockwise)
Preceding gene: 91788620
Following gene: 91788649
Centisome position: 55.83
GC content: 64.06
Gene sequence:
>498_bases ATGAAGTCTTTACCACGCCACCCCGGAAGCAGGCCCCCTGCATTTCGCCAAATCCATGCGCTGCTTGCCGCCGCCCTGCT CTGCGGCTGCGCCGCCACAAAGGCACCCAAGCCTGCCTCTGCCTTGCCAGCAGCACCCGCACCCCACCCCCTCGTGGGAA CCTGGACCTGGACACCGCCCGGCAAGTCCTGTACCGAAACCTGGCAGTACCGCGCCAACGGCACCCGGCTGAGTACCAGC GGTGAAGAAGTCACACAGGGCAATTACGAAATACCGCGCGTGCCTGGCCTGCTGGGCTTCTACCGGCTCGCCGAAACAGT CACCACCAGCAACGGCAAACGCGACTGCTCGGGTGACCTGCATGAAAGCCCGGAAGATGGCGCCACAGAGAGCGTCACGC GCTTCATCCAATTCAACCCCCAGCGGGACCAGTTCATCGTCTGCAAGGCCGAGTCGCTCCAGGCCTGCTTTGGGCCCCTG AAGCGCGTCTCCGGTTAA
Upstream 100 bases:
>100_bases CCTTCGTGTAGGGGGCAGCAAGGCAGCTCCGGTGGCTCCGGGTGGCCTCAGGTAGCGCCGGCTTGCTCGAGGTGACTCCA GGCTTCTTCATAATCACCCC
Downstream 100 bases:
>100_bases GGGGTCGCTATCAGTGATTGCAAAACGCCCGGCTCAAAGTGCTGCTCTATGTAATCGGCCAGTCCGTCAAATACGGCATC CAGCGTGGGTACCGTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKSLPRHPGSRPPAFRQIHALLAAALLCGCAATKAPKPASALPAAPAPHPLVGTWTWTPPGKSCTETWQYRANGTRLSTS GEEVTQGNYEIPRVPGLLGFYRLAETVTTSNGKRDCSGDLHESPEDGATESVTRFIQFNPQRDQFIVCKAESLQACFGPL KRVSG
Sequences:
>Translated_165_residues MKSLPRHPGSRPPAFRQIHALLAAALLCGCAATKAPKPASALPAAPAPHPLVGTWTWTPPGKSCTETWQYRANGTRLSTS GEEVTQGNYEIPRVPGLLGFYRLAETVTTSNGKRDCSGDLHESPEDGATESVTRFIQFNPQRDQFIVCKAESLQACFGPL KRVSG >Mature_165_residues MKSLPRHPGSRPPAFRQIHALLAAALLCGCAATKAPKPASALPAAPAPHPLVGTWTWTPPGKSCTETWQYRANGTRLSTS GEEVTQGNYEIPRVPGLLGFYRLAETVTTSNGKRDCSGDLHESPEDGATESVTRFIQFNPQRDQFIVCKAESLQACFGPL KRVSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17759; Mature: 17759
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLPRHPGSRPPAFRQIHALLAAALLCGCAATKAPKPASALPAAPAPHPLVGTWTWTPP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCC GKSCTETWQYRANGTRLSTSGEEVTQGNYEIPRVPGLLGFYRLAETVTTSNGKRDCSGDL CCCHHHHHHHCCCCCEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC HESPEDGATESVTRFIQFNPQRDQFIVCKAESLQACFGPLKRVSG CCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSLPRHPGSRPPAFRQIHALLAAALLCGCAATKAPKPASALPAAPAPHPLVGTWTWTPP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCC GKSCTETWQYRANGTRLSTSGEEVTQGNYEIPRVPGLLGFYRLAETVTTSNGKRDCSGDL CCCHHHHHHHCCCCCEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC HESPEDGATESVTRFIQFNPQRDQFIVCKAESLQACFGPLKRVSG CCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA