Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is dhaT [H]
Identifier: 91788389
GI number: 91788389
Start: 2641670
End: 2642806
Strand: Direct
Name: dhaT [H]
Synonym: Bpro_2526
Alternate gene names: 91788389
Gene position: 2641670-2642806 (Clockwise)
Preceding gene: 91788385
Following gene: 91788396
Centisome position: 50.8
GC content: 64.56
Gene sequence:
>1137_bases ATGGCCTTCATTTACTACGTGACCCAGATCCAGTTTGAATTTGGCGCGGTCAAACTGCTCAAGCAGGAGTGCGAGCGTGT GGGCATCACCCGGCCCCTGATCGTGACTGATCCGGGTGTCAAGGCGGCAGGTATTTTGCAAAAAGCGCTCGATGCCCTGC CCGGCATCGCCGTCACGGTATTCGACCAGACGCCCTCCAATCCCACCGAAGCGGCGGTGCGCGCGGCAGCCGCGCTCTAC AAGGCCGGCGGCTGCGATGGCCTGATCGCCGTGGGCGGCGGCTCGGCCATTGACTGCGCCAAGGGCGTGGCCATTGCGGC CACACACGAGGGCCCCCTGACCACTTACGCCACCATTGAAGGCGGTTCCCCAAAGATTTCGGATCGCGTCGCTCCGCTGA TCGCCGTGCCCACCACCAGCGGCACCGGCAGCGAGGTGGCACGCGGCGCGATCATCATCGTCGACGATCACCGCAAGCTC GGTTTTCATTCCTGGCACCTGGTGCCCAAGACAGCCATTTGCGATCCCGAACTCACGCTGGGCCTGCCCGCCATGCTGAC CGCCGCCACCGGCATGGACGCGATTGCGCACTGCATGGAAACCTTCATGTCGCCGGCCTTCAATCCGCCGGCCGACGGCA TCGGGCTGGACGGCCTGGAACGGGGCTGGTCGCATATTGAGCGTGCCACGCGCGACGGCAGCGACCGCGAGGCGCGCCTG AACCTGATGAGCGCCTCCATGCAGGGTGCGATGGCTTTTCAGAAAGGCCTGGGCTGCGTCCATTCCCTCAGCCACAGCCT GGGCGGCGTCGATCCCCGGCTGCACCATGGCACGCTCAATGCCATGTTCCTGCCGGCGGTGGTGCGTTTCAATGCCAGCG CCGAGTCAGTTCAAAAAGAGCGCCGACTAGACCGCATGGCCCGCGCCATGGGCTTGCGTTCGGGCAGTGACATTCCAGAT GCCATCAAGGACATGAATGCCCGCCTCGGCCTGCCTACGGGCCTGGCCGCCATGGGCGTGCAGCGCGACTGGTTTGACCG CATCATCGTGGGTGCGCTGGCCGATCACTGTCACAAGACAAATCCGCGCCTGGCAAGTCCCGAGGAATACCGGGAGATGC TGGAAACCTCGCTCTAA
Upstream 100 bases:
>100_bases GGTTTGCTTGCGGCCCATGCGCGCGTCCAGCCAGTAAAGTAAAGTCAATCCGTTTCGATAGATCACACCCGCATCGTACA ACGCAGAAAGACAGCAAATC
Downstream 100 bases:
>100_bases TGCCGCCGCTCAGGGGGCGTTGCAGCCTCCGATTCAATCAGGCGCAGCATGAAGGCTTCACATTGCGCAATTTGTTCGAG GGTGGCGAATTCATTCGGGC
Product: iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MAFIYYVTQIQFEFGAVKLLKQECERVGITRPLIVTDPGVKAAGILQKALDALPGIAVTVFDQTPSNPTEAAVRAAAALY KAGGCDGLIAVGGGSAIDCAKGVAIAATHEGPLTTYATIEGGSPKISDRVAPLIAVPTTSGTGSEVARGAIIIVDDHRKL GFHSWHLVPKTAICDPELTLGLPAMLTAATGMDAIAHCMETFMSPAFNPPADGIGLDGLERGWSHIERATRDGSDREARL NLMSASMQGAMAFQKGLGCVHSLSHSLGGVDPRLHHGTLNAMFLPAVVRFNASAESVQKERRLDRMARAMGLRSGSDIPD AIKDMNARLGLPTGLAAMGVQRDWFDRIIVGALADHCHKTNPRLASPEEYREMLETSL
Sequences:
>Translated_378_residues MAFIYYVTQIQFEFGAVKLLKQECERVGITRPLIVTDPGVKAAGILQKALDALPGIAVTVFDQTPSNPTEAAVRAAAALY KAGGCDGLIAVGGGSAIDCAKGVAIAATHEGPLTTYATIEGGSPKISDRVAPLIAVPTTSGTGSEVARGAIIIVDDHRKL GFHSWHLVPKTAICDPELTLGLPAMLTAATGMDAIAHCMETFMSPAFNPPADGIGLDGLERGWSHIERATRDGSDREARL NLMSASMQGAMAFQKGLGCVHSLSHSLGGVDPRLHHGTLNAMFLPAVVRFNASAESVQKERRLDRMARAMGLRSGSDIPD AIKDMNARLGLPTGLAAMGVQRDWFDRIIVGALADHCHKTNPRLASPEEYREMLETSL >Mature_377_residues AFIYYVTQIQFEFGAVKLLKQECERVGITRPLIVTDPGVKAAGILQKALDALPGIAVTVFDQTPSNPTEAAVRAAAALYK AGGCDGLIAVGGGSAIDCAKGVAIAATHEGPLTTYATIEGGSPKISDRVAPLIAVPTTSGTGSEVARGAIIIVDDHRKLG FHSWHLVPKTAICDPELTLGLPAMLTAATGMDAIAHCMETFMSPAFNPPADGIGLDGLERGWSHIERATRDGSDREARLN LMSASMQGAMAFQKGLGCVHSLSHSLGGVDPRLHHGTLNAMFLPAVVRFNASAESVQKERRLDRMARAMGLRSGSDIPDA IKDMNARLGLPTGLAAMGVQRDWFDRIIVGALADHCHKTNPRLASPEEYREMLETSL
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=423, Percent_Identity=27.4231678486998, Blast_Score=107, Evalue=1e-23, Organism=Escherichia coli, GI48994951, Length=356, Percent_Identity=36.2359550561798, Blast_Score=188, Evalue=5e-49, Organism=Escherichia coli, GI87082107, Length=368, Percent_Identity=33.1521739130435, Blast_Score=154, Evalue=6e-39, Organism=Escherichia coli, GI1789163, Length=380, Percent_Identity=31.3157894736842, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1787493, Length=404, Percent_Identity=30.1980198019802, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1789386, Length=351, Percent_Identity=30.4843304843305, Blast_Score=104, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17537053, Length=291, Percent_Identity=29.2096219931272, Blast_Score=108, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6321181, Length=375, Percent_Identity=34.4, Blast_Score=191, Evalue=2e-49, Organism=Drosophila melanogaster, GI24657991, Length=419, Percent_Identity=26.9689737470167, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 40013; Mature: 39882
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00913 ADH_IRON_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIYYVTQIQFEFGAVKLLKQECERVGITRPLIVTDPGVKAAGILQKALDALPGIAVTV CEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEE FDQTPSNPTEAAVRAAAALYKAGGCDGLIAVGGGSAIDCAKGVAIAATHEGPLTTYATIE ECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCEEEEEECCCCCEEEEEEC GGSPKISDRVAPLIAVPTTSGTGSEVARGAIIIVDDHRKLGFHSWHLVPKTAICDPELTL CCCCCCHHCCCCEEEEECCCCCCHHHHCCEEEEEECCCCCCCCEEECCCCCCCCCCCHHC GLPAMLTAATGMDAIAHCMETFMSPAFNPPADGIGLDGLERGWSHIERATRDGSDREARL CCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH NLMSASMQGAMAFQKGLGCVHSLSHSLGGVDPRLHHGTLNAMFLPAVVRFNASAESVQKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH RRLDRMARAMGLRSGSDIPDAIKDMNARLGLPTGLAAMGVQRDWFDRIIVGALADHCHKT HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC NPRLASPEEYREMLETSL CCCCCCHHHHHHHHHHCC >Mature Secondary Structure AFIYYVTQIQFEFGAVKLLKQECERVGITRPLIVTDPGVKAAGILQKALDALPGIAVTV EEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEE FDQTPSNPTEAAVRAAAALYKAGGCDGLIAVGGGSAIDCAKGVAIAATHEGPLTTYATIE ECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCEEEEEECCCCCEEEEEEC GGSPKISDRVAPLIAVPTTSGTGSEVARGAIIIVDDHRKLGFHSWHLVPKTAICDPELTL CCCCCCHHCCCCEEEEECCCCCCHHHHCCEEEEEECCCCCCCCEEECCCCCCCCCCCHHC GLPAMLTAATGMDAIAHCMETFMSPAFNPPADGIGLDGLERGWSHIERATRDGSDREARL CCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH NLMSASMQGAMAFQKGLGCVHSLSHSLGGVDPRLHHGTLNAMFLPAVVRFNASAESVQKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH RRLDRMARAMGLRSGSDIPDAIKDMNARLGLPTGLAAMGVQRDWFDRIIVGALADHCHKT HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC NPRLASPEEYREMLETSL CCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]