Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788385

Identifier: 91788385

GI number: 91788385

Start: 2636257

End: 2637144

Strand: Direct

Name: 91788385

Synonym: Bpro_2522

Alternate gene names: NA

Gene position: 2636257-2637144 (Clockwise)

Preceding gene: 91788384

Following gene: 91788389

Centisome position: 50.69

GC content: 63.96

Gene sequence:

>888_bases
GTGTGCCTGATCGCATTTGCCATCAATGCCTCTGAACGTTGGCCGCTGGTGATTGCGGCCAACCGCGATGAGTATTTAAA
CCGCCCGAGCCTGCCGCTGGCCCGCTGGACAAGCGTTTCCGGCCGGGAAATCATTTCCGGCCGCGACCTGCGTGCCGGCG
GAACCTGGCTGGGCATGACACCTGATGGGCGGGTGGCGTTTCTGACCAACGTGCGTGAAGGTTACCCGCAAGCAGCGGCG
CCCCGCTCCCGGGGTGAACTGGTGATGCGCTGGCTGGAAGCGAACTGCGAGGCCGGCGACTTTATCAGGGTACTGGAAAA
AGACGGCGCGGCCTACGGCGGATTCAATCTTGTGATGGGCGATTTTCAGCGGGATGCATGGACCTGGGTAACCAACAAGG
CGGCTTTGGGCTGGCATGCCCAGCCGCTGGCGGCCGGAATTTATGGGCTCTCTAACGCAGCGCTGGATACACCATGGCCA
AAAACCGTAGAGCTGAAGCAGACTCTCGCCACGGCCTTGTCGACCACCCCCGCTGCACATCAGCCGGAAGTGCTGCAGGC
GCCGCTGTGGACTGCCTTGGGCAACCGCCAGCGCGCTCCTCTTGCGAGCCTTCCTGACACCGGCGTGCCGCTGGTCATCG
AGGCGGCTTTGTCCAGCGCCTTTGTGGACTTTCCTGAAAACGCCTATGGCACCCGCTCCAGCACGGTGTTGCTGGCAAGC
GCCGCTGACCATGGCGACGGCGTGCGGCGCTGGGACCTGCAGCTGGAAGAACGAACGCATGTACGCGCAAAAGCGGACGC
GCAAGCCGCGGCCAATGCACCCAGGCGCCCTGCCAGCCGTTCGCTGGCCAGCCGCTACCAGACGGCCTGGCTCCAAACGG
GTGTTTAG

Upstream 100 bases:

>100_bases
CCACGGGTACGCCGCTGGCATTGCTGCCACTGCCCTATCCCCTGCTTGAAGATATCTGAGCGAACGCCCAAAATCTGCAA
GAAAGTCCGAAAGCTTTACC

Downstream 100 bases:

>100_bases
AGCCTGTTCACGATCTACAGGGGGTCGCGCAAGTGGATGTTCGGGATGGAATGCAAGGCGCAAAATCCAAGCCAAGGCTT
GTGCCTTGGCTGATTTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MCLIAFAINASERWPLVIAANRDEYLNRPSLPLARWTSVSGREIISGRDLRAGGTWLGMTPDGRVAFLTNVREGYPQAAA
PRSRGELVMRWLEANCEAGDFIRVLEKDGAAYGGFNLVMGDFQRDAWTWVTNKAALGWHAQPLAAGIYGLSNAALDTPWP
KTVELKQTLATALSTTPAAHQPEVLQAPLWTALGNRQRAPLASLPDTGVPLVIEAALSSAFVDFPENAYGTRSSTVLLAS
AADHGDGVRRWDLQLEERTHVRAKADAQAAANAPRRPASRSLASRYQTAWLQTGV

Sequences:

>Translated_295_residues
MCLIAFAINASERWPLVIAANRDEYLNRPSLPLARWTSVSGREIISGRDLRAGGTWLGMTPDGRVAFLTNVREGYPQAAA
PRSRGELVMRWLEANCEAGDFIRVLEKDGAAYGGFNLVMGDFQRDAWTWVTNKAALGWHAQPLAAGIYGLSNAALDTPWP
KTVELKQTLATALSTTPAAHQPEVLQAPLWTALGNRQRAPLASLPDTGVPLVIEAALSSAFVDFPENAYGTRSSTVLLAS
AADHGDGVRRWDLQLEERTHVRAKADAQAAANAPRRPASRSLASRYQTAWLQTGV
>Mature_295_residues
MCLIAFAINASERWPLVIAANRDEYLNRPSLPLARWTSVSGREIISGRDLRAGGTWLGMTPDGRVAFLTNVREGYPQAAA
PRSRGELVMRWLEANCEAGDFIRVLEKDGAAYGGFNLVMGDFQRDAWTWVTNKAALGWHAQPLAAGIYGLSNAALDTPWP
KTVELKQTLATALSTTPAAHQPEVLQAPLWTALGNRQRAPLASLPDTGVPLVIEAALSSAFVDFPENAYGTRSSTVLLAS
AADHGDGVRRWDLQLEERTHVRAKADAQAAANAPRRPASRSLASRYQTAWLQTGV

Specific function: Unknown

COG id: COG3332

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190570176, Length=258, Percent_Identity=33.7209302325581, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17566294, Length=254, Percent_Identity=28.3464566929134, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17563216, Length=262, Percent_Identity=27.4809160305344, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32012; Mature: 32012

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLIAFAINASERWPLVIAANRDEYLNRPSLPLARWTSVSGREIISGRDLRAGGTWLGMT
CEEEEEEECCCCCCCEEEEECCHHHCCCCCCCHHHHCCCCCCEEECCCCCCCCCCEEEEC
PDGRVAFLTNVREGYPQAAAPRSRGELVMRWLEANCEAGDFIRVLEKDGAAYGGFNLVMG
CCCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHCCCCCCCCEEEEE
DFQRDAWTWVTNKAALGWHAQPLAAGIYGLSNAALDTPWPKTVELKQTLATALSTTPAAH
CCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
QPEVLQAPLWTALGNRQRAPLASLPDTGVPLVIEAALSSAFVDFPENAYGTRSSTVLLAS
CCHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCEEEEEE
AADHGDGVRRWDLQLEERTHVRAKADAQAAANAPRRPASRSLASRYQTAWLQTGV
CCCCCCCEEEEEEEECCHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCLIAFAINASERWPLVIAANRDEYLNRPSLPLARWTSVSGREIISGRDLRAGGTWLGMT
CEEEEEEECCCCCCCEEEEECCHHHCCCCCCCHHHHCCCCCCEEECCCCCCCCCCEEEEC
PDGRVAFLTNVREGYPQAAAPRSRGELVMRWLEANCEAGDFIRVLEKDGAAYGGFNLVMG
CCCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHCCCCCCCCEEEEE
DFQRDAWTWVTNKAALGWHAQPLAAGIYGLSNAALDTPWPKTVELKQTLATALSTTPAAH
CCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
QPEVLQAPLWTALGNRQRAPLASLPDTGVPLVIEAALSSAFVDFPENAYGTRSSTVLLAS
CCHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCEEEEEE
AADHGDGVRRWDLQLEERTHVRAKADAQAAANAPRRPASRSLASRYQTAWLQTGV
CCCCCCCEEEEEEEECCHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA