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The map label for this gene is glcD [H]

Identifier: 91787707

GI number: 91787707

Start: 1891162

End: 1892583

Strand: Reverse

Name: glcD [H]

Synonym: Bpro_1828

Alternate gene names: 91787707

Gene position: 1892583-1891162 (Counterclockwise)

Preceding gene: 91787708

Following gene: 91787702

Centisome position: 36.39

GC content: 63.85

Gene sequence:

>1422_bases
ATGAGCGCTCACCCTGATTTACTGGAAACCCTGAGGCAAATCGCCGGCCCCGGCCAGGTACTCAGTGAAGGCGACCTGAC
CGCCTGGGAACTCGACTGGCGAAAGCGCTCACGCGGCAAGGCGCTGGCCGTGGTCAGGCCCGCCACCACCGCGGAGGTAG
CCGCCATCGTCAAGGCCTGCGCGGCGGCCGGCGTGAGCATCGTCACCCAAGGCGGCAACACCGGGCTGGCGGTCGGATCC
ATCCCCGACGACTCGGGCCGGCAGGTGGTGCTGAGCCTGCAGCGCATGAATGCCGTGCGCCAGATCGATGCGGCAAATCT
CACGGTCACCGTGGAAGCCGGCTGCATTCTGCAAACGCTGCAGGAAGCCGCCGACAAGGCGGGGTTTCTTTTCCCGCTGA
GCCTGGCCGCCGAAGGCAGCTGCACCATTGGCGGGAACCTGGCGACGAACGCCGGTGGCACGCAGGTCGTGCGCTACGGC
AATGCGCGTGATTTGTGCCTGGGGCTGGAGGTGGTGACAGCGCAAGGTGACATCTGGAATGGCCTTTCCGGCCTGCGCAA
GGACAACACGGGCTACGACCTGCGCGACCTGTTCATCGGCAGCGAAGGCACGCTCGGCGTCATCACCGCCGCCACGCTCA
AGCTGTATCCGCAGCCCGCCGTCCAGCTCACCGCATGGGCGGCCGTACCGTCGATGCAGGATGCCGTAAACCTTCTTGCA
CTGGCCCACCGGCACCTGGGCGCCGGCCTGACCGGATTTGAGGTCATGGGACAGTTTGCCCTGAGCCTGGTTGCCAAAAA
CTTCAGGCAACTGCGCGTGCCGCTGTATGAAGAGACACCGTTCTGCGTACTGCTTGAAAATTCTGACCCGGAATCAGAAA
CCCATGCCCGCGAACAGTTCGAACGGCTGCTGGAGACCGCGCTGGACAAGGGCTGCGTGACGGATGCGGTCGTTGCTGAA
AATCTGGCCCAGGCACACCAGCTCTGGCACATCCGTGAAAGCATTCCGCTGGCGCAAGCCGAGGAAGGCCTGAACATCAA
GCACGACATCTCGGTCGCGGTTTCGCGCATCCCGGAGTTTGTGGAGGTCACCGATGCCCTGCTGGTGCAGGCCATTCCGG
GTGTGCGGCTGGTGAATTTTGGCCACCTGGGCGACGGTAACCTGCACTACAACGTGCAGGCGCCCGCTGACGGCGATGCC
CAGGCTTTTCTGCGGGAGCATGAGGACACCGTCAATTCGCTGGTCTATGACTCGGTGGCGCGCTTTGGCGGCTCATTTTC
TGCCGAGCACGGCGTGGGCAGCCTCAAGCTCGACAAGCTGGAGCACTACAAATCCCCCGTGGCGCTGGGCATGATGCGGG
CCATCAAGCACGCCCTTGACCCGCAAAACCTGTTTAATCCGGGGCGGGTGCTGCGGATATAG

Upstream 100 bases:

>100_bases
AAGTCCTGCTGTGCCTGGTACTTTTTGCGGCCTGTGCGCTGCATGTGCGGGTACGGCTGAAAAATGCGGCGCCACCCGCC
GCCACCGGAGAAAAGACAGC

Downstream 100 bases:

>100_bases
CTTGAACGAACACCTTCGAGCGACTGATGAAGCCACTCATCTGGCCAGAATTCAGCACAGGCAGGATGGCTCGCCATGCG
CCCTCCCACGTTCAGGCCTC

Product: FAD linked oxidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MSAHPDLLETLRQIAGPGQVLSEGDLTAWELDWRKRSRGKALAVVRPATTAEVAAIVKACAAAGVSIVTQGGNTGLAVGS
IPDDSGRQVVLSLQRMNAVRQIDAANLTVTVEAGCILQTLQEAADKAGFLFPLSLAAEGSCTIGGNLATNAGGTQVVRYG
NARDLCLGLEVVTAQGDIWNGLSGLRKDNTGYDLRDLFIGSEGTLGVITAATLKLYPQPAVQLTAWAAVPSMQDAVNLLA
LAHRHLGAGLTGFEVMGQFALSLVAKNFRQLRVPLYEETPFCVLLENSDPESETHAREQFERLLETALDKGCVTDAVVAE
NLAQAHQLWHIRESIPLAQAEEGLNIKHDISVAVSRIPEFVEVTDALLVQAIPGVRLVNFGHLGDGNLHYNVQAPADGDA
QAFLREHEDTVNSLVYDSVARFGGSFSAEHGVGSLKLDKLEHYKSPVALGMMRAIKHALDPQNLFNPGRVLRI

Sequences:

>Translated_473_residues
MSAHPDLLETLRQIAGPGQVLSEGDLTAWELDWRKRSRGKALAVVRPATTAEVAAIVKACAAAGVSIVTQGGNTGLAVGS
IPDDSGRQVVLSLQRMNAVRQIDAANLTVTVEAGCILQTLQEAADKAGFLFPLSLAAEGSCTIGGNLATNAGGTQVVRYG
NARDLCLGLEVVTAQGDIWNGLSGLRKDNTGYDLRDLFIGSEGTLGVITAATLKLYPQPAVQLTAWAAVPSMQDAVNLLA
LAHRHLGAGLTGFEVMGQFALSLVAKNFRQLRVPLYEETPFCVLLENSDPESETHAREQFERLLETALDKGCVTDAVVAE
NLAQAHQLWHIRESIPLAQAEEGLNIKHDISVAVSRIPEFVEVTDALLVQAIPGVRLVNFGHLGDGNLHYNVQAPADGDA
QAFLREHEDTVNSLVYDSVARFGGSFSAEHGVGSLKLDKLEHYKSPVALGMMRAIKHALDPQNLFNPGRVLRI
>Mature_472_residues
SAHPDLLETLRQIAGPGQVLSEGDLTAWELDWRKRSRGKALAVVRPATTAEVAAIVKACAAAGVSIVTQGGNTGLAVGSI
PDDSGRQVVLSLQRMNAVRQIDAANLTVTVEAGCILQTLQEAADKAGFLFPLSLAAEGSCTIGGNLATNAGGTQVVRYGN
ARDLCLGLEVVTAQGDIWNGLSGLRKDNTGYDLRDLFIGSEGTLGVITAATLKLYPQPAVQLTAWAAVPSMQDAVNLLAL
AHRHLGAGLTGFEVMGQFALSLVAKNFRQLRVPLYEETPFCVLLENSDPESETHAREQFERLLETALDKGCVTDAVVAEN
LAQAHQLWHIRESIPLAQAEEGLNIKHDISVAVSRIPEFVEVTDALLVQAIPGVRLVNFGHLGDGNLHYNVQAPADGDAQ
AFLREHEDTVNSLVYDSVARFGGSFSAEHGVGSLKLDKLEHYKSPVALGMMRAIKHALDPQNLFNPGRVLRI

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=456, Percent_Identity=38.8157894736842, Blast_Score=296, Evalue=4e-80,
Organism=Homo sapiens, GI37595756, Length=436, Percent_Identity=32.1100917431193, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI37595754, Length=459, Percent_Identity=30.9368191721133, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI4501993, Length=198, Percent_Identity=33.8383838383838, Blast_Score=102, Evalue=7e-22,
Organism=Escherichia coli, GI1789351, Length=469, Percent_Identity=28.1449893390192, Blast_Score=151, Evalue=8e-38,
Organism=Escherichia coli, GI48994907, Length=198, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994914, Length=175, Percent_Identity=29.1428571428571, Blast_Score=69, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17534361, Length=454, Percent_Identity=34.5814977973568, Blast_Score=263, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI71992373, Length=452, Percent_Identity=26.3274336283186, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI71992381, Length=452, Percent_Identity=25.2212389380531, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71992392, Length=407, Percent_Identity=25.7985257985258, Blast_Score=121, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=198, Percent_Identity=29.2929292929293, Blast_Score=95, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6320023, Length=476, Percent_Identity=35.7142857142857, Blast_Score=307, Evalue=3e-84,
Organism=Saccharomyces cerevisiae, GI6320764, Length=474, Percent_Identity=31.6455696202532, Blast_Score=264, Evalue=3e-71,
Organism=Saccharomyces cerevisiae, GI6320027, Length=453, Percent_Identity=26.4900662251656, Blast_Score=134, Evalue=3e-32,
Organism=Drosophila melanogaster, GI18921117, Length=463, Percent_Identity=38.6609071274298, Blast_Score=315, Evalue=6e-86,
Organism=Drosophila melanogaster, GI24639277, Length=463, Percent_Identity=38.6609071274298, Blast_Score=315, Evalue=6e-86,
Organism=Drosophila melanogaster, GI24639275, Length=463, Percent_Identity=38.6609071274298, Blast_Score=315, Evalue=6e-86,
Organism=Drosophila melanogaster, GI24653753, Length=210, Percent_Identity=30.952380952381, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50522; Mature: 50391

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHPDLLETLRQIAGPGQVLSEGDLTAWELDWRKRSRGKALAVVRPATTAEVAAIVKAC
CCCCHHHHHHHHHHCCCCCEECCCCCEEEEECHHHCCCCCEEEEECCCCHHHHHHHHHHH
AAAGVSIVTQGGNTGLAVGSIPDDSGRQVVLSLQRMNAVRQIDAANLTVTVEAGCILQTL
HHCCCEEEEECCCCCEEEECCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECHHHHHHH
QEAADKAGFLFPLSLAAEGSCTIGGNLATNAGGTQVVRYGNARDLCLGLEVVTAQGDIWN
HHHHHHCCEEEEEEECCCCCEEECCCEECCCCCCEEEEECCCCCEEEEEEEEEECCCHHH
GLSGLRKDNTGYDLRDLFIGSEGTLGVITAATLKLYPQPAVQLTAWAAVPSMQDAVNLLA
HHHHCCCCCCCCCHHHEEECCCCCEEEEEEEEEEECCCCCCEEEEHHHCCCHHHHHHHHH
LAHRHLGAGLTGFEVMGQFALSLVAKNFRQLRVPLYEETPFCVLLENSDPESETHAREQF
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHH
ERLLETALDKGCVTDAVVAENLAQAHQLWHIRESIPLAQAEEGLNIKHDISVAVSRIPEF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHCHHH
VEVTDALLVQAIPGVRLVNFGHLGDGNLHYNVQAPADGDAQAFLREHEDTVNSLVYDSVA
HHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RFGGSFSAEHGVGSLKLDKLEHYKSPVALGMMRAIKHALDPQNLFNPGRVLRI
HHCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCEEEC
>Mature Secondary Structure 
SAHPDLLETLRQIAGPGQVLSEGDLTAWELDWRKRSRGKALAVVRPATTAEVAAIVKAC
CCCHHHHHHHHHHCCCCCEECCCCCEEEEECHHHCCCCCEEEEECCCCHHHHHHHHHHH
AAAGVSIVTQGGNTGLAVGSIPDDSGRQVVLSLQRMNAVRQIDAANLTVTVEAGCILQTL
HHCCCEEEEECCCCCEEEECCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECHHHHHHH
QEAADKAGFLFPLSLAAEGSCTIGGNLATNAGGTQVVRYGNARDLCLGLEVVTAQGDIWN
HHHHHHCCEEEEEEECCCCCEEECCCEECCCCCCEEEEECCCCCEEEEEEEEEECCCHHH
GLSGLRKDNTGYDLRDLFIGSEGTLGVITAATLKLYPQPAVQLTAWAAVPSMQDAVNLLA
HHHHCCCCCCCCCHHHEEECCCCCEEEEEEEEEEECCCCCCEEEEHHHCCCHHHHHHHHH
LAHRHLGAGLTGFEVMGQFALSLVAKNFRQLRVPLYEETPFCVLLENSDPESETHAREQF
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHH
ERLLETALDKGCVTDAVVAENLAQAHQLWHIRESIPLAQAEEGLNIKHDISVAVSRIPEF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHCHHH
VEVTDALLVQAIPGVRLVNFGHLGDGNLHYNVQAPADGDAQAFLREHEDTVNSLVYDSVA
HHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RFGGSFSAEHGVGSLKLDKLEHYKSPVALGMMRAIKHALDPQNLFNPGRVLRI
HHCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]