Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787708

Identifier: 91787708

GI number: 91787708

Start: 1892580

End: 1892984

Strand: Reverse

Name: 91787708

Synonym: Bpro_1829

Alternate gene names: NA

Gene position: 1892984-1892580 (Counterclockwise)

Preceding gene: 91787712

Following gene: 91787707

Centisome position: 36.4

GC content: 63.95

Gene sequence:

>405_bases
ATGACACTCCACTCCATGAACAAAGCAACCCAAATTGACCTCACGCGCTGGTTGGCCCTGGGCAGTCTGGCCGGCCTGAT
TGTGCTGGGCCTGGCCTGGGAACTGTGGCTCGCGCCCATCCGGCCGGGCGGCTCCCTGCTCGCGCTCAAGGTCCTGCCCC
TGTGCATTCCGCTGGCCGGCATCCTGAAAAACCGCATGTACACCTACCGCTGGGTCAGCCTGCTGGTGTGGCTTTACTTC
ACCGAAGGCGCGGTGCGGGCCTGGAGCGACCGCGCGCCGGGCAACTACTTTGCCATGCTGGAAGTCCTGCTGTGCCTGGT
ACTTTTTGCGGCCTGTGCGCTGCATGTGCGGGTACGGCTGAAAAATGCGGCGCCACCCGCCGCCACCGGAGAAAAGACAG
CATGA

Upstream 100 bases:

>100_bases
TGCAGGGATTGCTGGAATTTCATCCCCGGTATCATGCCTGACGGCAAATCAGAAAATCGACAGATCGGTGATTCAGCAAT
GACGCGAAACCACCCGGTTG

Downstream 100 bases:

>100_bases
GCGCTCACCCTGATTTACTGGAAACCCTGAGGCAAATCGCCGGCCCCGGCCAGGTACTCAGTGAAGGCGACCTGACCGCC
TGGGAACTCGACTGGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Lipoprotein

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTLHSMNKATQIDLTRWLALGSLAGLIVLGLAWELWLAPIRPGGSLLALKVLPLCIPLAGILKNRMYTYRWVSLLVWLYF
TEGAVRAWSDRAPGNYFAMLEVLLCLVLFAACALHVRVRLKNAAPPAATGEKTA

Sequences:

>Translated_134_residues
MTLHSMNKATQIDLTRWLALGSLAGLIVLGLAWELWLAPIRPGGSLLALKVLPLCIPLAGILKNRMYTYRWVSLLVWLYF
TEGAVRAWSDRAPGNYFAMLEVLLCLVLFAACALHVRVRLKNAAPPAATGEKTA
>Mature_133_residues
TLHSMNKATQIDLTRWLALGSLAGLIVLGLAWELWLAPIRPGGSLLALKVLPLCIPLAGILKNRMYTYRWVSLLVWLYFT
EGAVRAWSDRAPGNYFAMLEVLLCLVLFAACALHVRVRLKNAAPPAATGEKTA

Specific function: Unknown

COG id: COG3308

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14760; Mature: 14629

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHSMNKATQIDLTRWLALGSLAGLIVLGLAWELWLAPIRPGGSLLALKVLPLCIPLAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ILKNRMYTYRWVSLLVWLYFTEGAVRAWSDRAPGNYFAMLEVLLCLVLFAACALHVRVRL
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
KNAAPPAATGEKTA
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TLHSMNKATQIDLTRWLALGSLAGLIVLGLAWELWLAPIRPGGSLLALKVLPLCIPLAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ILKNRMYTYRWVSLLVWLYFTEGAVRAWSDRAPGNYFAMLEVLLCLVLFAACALHVRVRL
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
KNAAPPAATGEKTA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA