Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787682
Identifier: 91787682
GI number: 91787682
Start: 1863472
End: 1864185
Strand: Reverse
Name: 91787682
Synonym: Bpro_1801
Alternate gene names: NA
Gene position: 1864185-1863472 (Counterclockwise)
Preceding gene: 91787692
Following gene: 91787677
Centisome position: 35.85
GC content: 55.74
Gene sequence:
>714_bases ATGACAAAAAATCCAGAAGAACTACTGATGGCGGGGCTGCCCTTGATGGGCGTGCTTACCCTTTGGTACTGGCTGCGATT GCGCTGGATTGCGAAAGAGAAACGCCGAATCCCCAGGCATTGGCCCTTGCATGCGCGGCCACTGGTAAACAGTGAGGAAT CGCAGCTCTGGCGCTGGCTGGCCGAGACTTTTGATGACCACCACATCATGATCAAGGTGCCGGTTACCCGTTTCGTCCGG CCTAATGCCAGTGAAAATGGACTGTACTGGTACAGCCTGCTCAAAAGCACCAGCTGTACATTCACCGTGTGTTCATTGGA TGGCCATGTTGTTGGCTGTGTCGATGTGCCCAAGTCTTCCGGACTGTCCCAGAAGTCAAAAAATCTGAAGCACAATTTAC TGGCGCAATGTGGTATTGCCTATGCCGTGATCAACGCGTCGAGGCTGCCAAACCCGGATGAACTCCGCAATGATTTCCTC GGTGAAGCGGCTGCAAGAAGCCGGGATCTGAAGCGCGAGCAGGCCGCAGTGGCGGCCGCCCGGGCCAACCTGCAGAAAAC TCTGGTACAGAAACGCGACATGCGCCAGCGTCAGGCTACCCATGACTACCGGGACAGCAGCAGCATGCCCACAGACTGGC ACGATTCATTTCTCATCCAGTCCAACAGTATGCCGAGTGAGTTGAGGCACGCTGACGGGCGCAAGGTAGCATGA
Upstream 100 bases:
>100_bases CAACTTTAGTAACATTTTTTGAATTGTGTGATTATTTTCCTACCCAATTACTCCTGTTGAGCGTAACTTGTAAGCATTGG TGACAAACCGGGAGCCGTAA
Downstream 100 bases:
>100_bases AGCTGAAGCTGAAGCTGAAGCGTAACCGCGCAAGCAAGCATCAGGTCGAAATGCTGGACAGATCCTGCGCCGTGAGCCAG CGCCACTGACCGGGCTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTKNPEELLMAGLPLMGVLTLWYWLRLRWIAKEKRRIPRHWPLHARPLVNSEESQLWRWLAETFDDHHIMIKVPVTRFVR PNASENGLYWYSLLKSTSCTFTVCSLDGHVVGCVDVPKSSGLSQKSKNLKHNLLAQCGIAYAVINASRLPNPDELRNDFL GEAAARSRDLKREQAAVAAARANLQKTLVQKRDMRQRQATHDYRDSSSMPTDWHDSFLIQSNSMPSELRHADGRKVA
Sequences:
>Translated_237_residues MTKNPEELLMAGLPLMGVLTLWYWLRLRWIAKEKRRIPRHWPLHARPLVNSEESQLWRWLAETFDDHHIMIKVPVTRFVR PNASENGLYWYSLLKSTSCTFTVCSLDGHVVGCVDVPKSSGLSQKSKNLKHNLLAQCGIAYAVINASRLPNPDELRNDFL GEAAARSRDLKREQAAVAAARANLQKTLVQKRDMRQRQATHDYRDSSSMPTDWHDSFLIQSNSMPSELRHADGRKVA >Mature_236_residues TKNPEELLMAGLPLMGVLTLWYWLRLRWIAKEKRRIPRHWPLHARPLVNSEESQLWRWLAETFDDHHIMIKVPVTRFVRP NASENGLYWYSLLKSTSCTFTVCSLDGHVVGCVDVPKSSGLSQKSKNLKHNLLAQCGIAYAVINASRLPNPDELRNDFLG EAAARSRDLKREQAAVAAARANLQKTLVQKRDMRQRQATHDYRDSSSMPTDWHDSFLIQSNSMPSELRHADGRKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27168; Mature: 27037
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNPEELLMAGLPLMGVLTLWYWLRLRWIAKEKRRIPRHWPLHARPLVNSEESQLWRWL CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH AETFDDHHIMIKVPVTRFVRPNASENGLYWYSLLKSTSCTFTVCSLDGHVVGCVDVPKSS HHHCCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEECCCCC GLSQKSKNLKHNLLAQCGIAYAVINASRLPNPDELRNDFLGEAAARSRDLKREQAAVAAA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RANLQKTLVQKRDMRQRQATHDYRDSSSMPTDWHDSFLIQSNSMPSELRHADGRKVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCC >Mature Secondary Structure TKNPEELLMAGLPLMGVLTLWYWLRLRWIAKEKRRIPRHWPLHARPLVNSEESQLWRWL CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH AETFDDHHIMIKVPVTRFVRPNASENGLYWYSLLKSTSCTFTVCSLDGHVVGCVDVPKSS HHHCCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEECCCCC GLSQKSKNLKHNLLAQCGIAYAVINASRLPNPDELRNDFLGEAAARSRDLKREQAAVAAA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RANLQKTLVQKRDMRQRQATHDYRDSSSMPTDWHDSFLIQSNSMPSELRHADGRKVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA