Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787692
Identifier: 91787692
GI number: 91787692
Start: 1875219
End: 1875548
Strand: Reverse
Name: 91787692
Synonym: Bpro_1811
Alternate gene names: NA
Gene position: 1875548-1875219 (Counterclockwise)
Preceding gene: 91787693
Following gene: 91787682
Centisome position: 36.07
GC content: 62.73
Gene sequence:
>330_bases GTGGCGCTGGCCAGAGTGTCTGCGGGCGATGCGGCCGTCGAGCGCGACATTTTCATCGAGTTTCAACGGGCCAATGAGGG AGATGCCGCGCTTCTGGAACAGGCGGTGGCCGACGGTGACATCGCCCAGGTCAAACGGCTGGCCCATCTCATCAAAGGCG CTTGCGCCATGGTCGGAGCCCTCGCGCTGGCCAACGTCTGTGAACGTATCGAGCGGGCCAGCCGCGACGGCGACTGGAAG ACCATCGTGGTCAGCATGATCGAATTCGAGCAGGAATTGACGGAGCTAAACCGATACCTGGCCGAGGTCCAGGGACCAGC CACCTCTTGA
Upstream 100 bases:
>100_bases TGCGGCCAGCCTGGCGCGCTGGCTACCCATCCCCGCGGCCCCCGTCACACCGCCCGCCTATTTTCCTGTAGCACGGCGGG CGAGGACACCGATTGACCAT
Downstream 100 bases:
>100_bases GTGCTGGCCAGCGTACCGGTTGGTCCGTGCAGCACGGCTGGACCATCGGGTGTGCTCCGCATCCCTGATTGCCATAGCAA ATAGAACTGCACCCCGGGGA
Product: Hpt domain-containing protein
Products: NA
Alternate protein names: PAS/PAC Sensor Hybrid Histidine Kinase
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MALARVSAGDAAVERDIFIEFQRANEGDAALLEQAVADGDIAQVKRLAHLIKGACAMVGALALANVCERIERASRDGDWK TIVVSMIEFEQELTELNRYLAEVQGPATS
Sequences:
>Translated_109_residues MALARVSAGDAAVERDIFIEFQRANEGDAALLEQAVADGDIAQVKRLAHLIKGACAMVGALALANVCERIERASRDGDWK TIVVSMIEFEQELTELNRYLAEVQGPATS >Mature_108_residues ALARVSAGDAAVERDIFIEFQRANEGDAALLEQAVADGDIAQVKRLAHLIKGACAMVGALALANVCERIERASRDGDWKT IVVSMIEFEQELTELNRYLAEVQGPATS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11775; Mature: 11643
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS50894 HPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALARVSAGDAAVERDIFIEFQRANEGDAALLEQAVADGDIAQVKRLAHLIKGACAMVGA CCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LALANVCERIERASRDGDWKTIVVSMIEFEQELTELNRYLAEVQGPATS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALARVSAGDAAVERDIFIEFQRANEGDAALLEQAVADGDIAQVKRLAHLIKGACAMVGA CCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LALANVCERIERASRDGDWKTIVVSMIEFEQELTELNRYLAEVQGPATS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA