Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787219
Identifier: 91787219
GI number: 91787219
Start: 1362084
End: 1362476
Strand: Direct
Name: 91787219
Synonym: Bpro_1323
Alternate gene names: NA
Gene position: 1362084-1362476 (Clockwise)
Preceding gene: 91787218
Following gene: 91787220
Centisome position: 26.19
GC content: 66.67
Gene sequence:
>393_bases ATGACGCCGCATCGGTCCTTGCCACGGTCACAGGCACGCCGTCCATCGGCGGGCTTCACGCTGATAGAAGTGCTGGTGGC CCTGGGCATTGTGGCGGTCGCCCTCGCAGCCGGCTCTCAGGCTACGAGCGCCCTGACCAACAACGCCCGGCGCCAGTCCG ACGTTTTGCTCGCGCATTTGTGCGCAGAAAACCAGCTGGTCAAGGTTCGCCTGTTGCGGCAGATGCCTGGCGTCGGCGAC AGCACGGAGGCCTGCGAGCAGGCCGGACGCGGCCTGCAGGTCACGCTGTCGGTGCGGCCCACACCCAACCCTGAATTCCG GCGCGTGGATGCGCAGGTGAGCGACGGCAACACGCCGGTTCTCAAGCTGTCCACGGTGGTCACGCGCTATTGA
Upstream 100 bases:
>100_bases CGCAGGCGGTGGAGCTTTTCAGCGTCAGCCAGTCTGATCGCACCCTGCGCGTAGCCACCGACGGGCTGCGTCCCTTTACT GTCCAGGGGCCGGTGCAGCC
Downstream 100 bases:
>100_bases GCTATTGAGCCATGCAGATGCATCCCACGCGAACCCAAGTCCGGAGCAGCGGCTTCACACTGATCGAGATGCTTGTGGCC ATCACGGTCATGGCGCTGCT
Product: general secretion pathway protein I
Products: NA
Alternate protein names: Type II Secretion System Protein I/J
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTPHRSLPRSQARRPSAGFTLIEVLVALGIVAVALAAGSQATSALTNNARRQSDVLLAHLCAENQLVKVRLLRQMPGVGD STEACEQAGRGLQVTLSVRPTPNPEFRRVDAQVSDGNTPVLKLSTVVTRY
Sequences:
>Translated_130_residues MTPHRSLPRSQARRPSAGFTLIEVLVALGIVAVALAAGSQATSALTNNARRQSDVLLAHLCAENQLVKVRLLRQMPGVGD STEACEQAGRGLQVTLSVRPTPNPEFRRVDAQVSDGNTPVLKLSTVVTRY >Mature_129_residues TPHRSLPRSQARRPSAGFTLIEVLVALGIVAVALAAGSQATSALTNNARRQSDVLLAHLCAENQLVKVRLLRQMPGVGDS TEACEQAGRGLQVTLSVRPTPNPEFRRVDAQVSDGNTPVLKLSTVVTRY
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13912; Mature: 13781
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPHRSLPRSQARRPSAGFTLIEVLVALGIVAVALAAGSQATSALTNNARRQSDVLLAHL CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH CAENQLVKVRLLRQMPGVGDSTEACEQAGRGLQVTLSVRPTPNPEFRRVDAQVSDGNTPV HCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCEEECCEECCCCCCE LKLSTVVTRY EEHHHHHHCC >Mature Secondary Structure TPHRSLPRSQARRPSAGFTLIEVLVALGIVAVALAAGSQATSALTNNARRQSDVLLAHL CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH CAENQLVKVRLLRQMPGVGDSTEACEQAGRGLQVTLSVRPTPNPEFRRVDAQVSDGNTPV HCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCEEECCEECCCCCCE LKLSTVVTRY EEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA