Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787220
Identifier: 91787220
GI number: 91787220
Start: 1362488
End: 1363195
Strand: Direct
Name: 91787220
Synonym: Bpro_1324
Alternate gene names: NA
Gene position: 1362488-1363195 (Clockwise)
Preceding gene: 91787219
Following gene: 91787221
Centisome position: 26.2
GC content: 67.66
Gene sequence:
>708_bases ATGCAGATGCATCCCACGCGAACCCAAGTCCGGAGCAGCGGCTTCACACTGATCGAGATGCTTGTGGCCATCACGGTCAT GGCGCTGCTGGCCGTGCTTAGCTGGCGCGGCCTCGATGGGATGGCGCGCGCGCAGGCGCAGACCAGCCAGCGTGCCGACG AGGTGCTGACCCTGCAGGCCGGCCTTGCGCAATGGAAAGTCGATCTGGATGCGCTGGCCCAGCTACCCCGTGTGAGCAAC CTGGATTGGGATGGCCGCGTGCTGCGCATGACGCGGCGCACGGCCTCGGGCGGCGAGGGCGTTCTGGTGGTGGCATGGAC CCGCCGCATCGATGCGGCTGGGGGGCAGTGGCTGCGCTGGCAGTCGCCGGTGCTGAGTACGGCCGCCGACTGGAACGAGT CCTGGAGCCGGGCGGCGCTTTGGGCGCAAAACGCCAGCACCGAGGATCGCGCGCGCGAAGTGCCTGTGACGCCGCTGGAA GACTGGCAGCTCTTTTATTTCCGCAGCGACGCGTGGACCAATCCGCAGTCCAGCGACGGCAGCCGGGGGACGGCCATGAC CCCGCCGGCGGCCTTGCAACTGGTGTCCCAGCAGACTGTGGTGCCCGACGGCATCCGCTTGGTGCTGACCCTGCCGCCCG GTCAGGCGATCAGCGGCAAGCTCACCGTTGACTGGGTGCGCCCAACTTTCGGAAGCGAAAAATCTTGA
Upstream 100 bases:
>100_bases CCAACCCTGAATTCCGGCGCGTGGATGCGCAGGTGAGCGACGGCAACACGCCGGTTCTCAAGCTGTCCACGGTGGTCACG CGCTATTGAGCTATTGAGCC
Downstream 100 bases:
>100_bases ACCGGTGGATATTGCCCCCACGCTTGTCACTGCGTGTACTGCGCTGCCCCCCGAGGGGGCCGCTGCGCCTGCGGTCTGGC AAAGCCAGTCCCGCGGCCCC
Product: methylation
Products: NA
Alternate protein names: Methylation; Type II Secretory Pathway Component
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MQMHPTRTQVRSSGFTLIEMLVAITVMALLAVLSWRGLDGMARAQAQTSQRADEVLTLQAGLAQWKVDLDALAQLPRVSN LDWDGRVLRMTRRTASGGEGVLVVAWTRRIDAAGGQWLRWQSPVLSTAADWNESWSRAALWAQNASTEDRAREVPVTPLE DWQLFYFRSDAWTNPQSSDGSRGTAMTPPAALQLVSQQTVVPDGIRLVLTLPPGQAISGKLTVDWVRPTFGSEKS
Sequences:
>Translated_235_residues MQMHPTRTQVRSSGFTLIEMLVAITVMALLAVLSWRGLDGMARAQAQTSQRADEVLTLQAGLAQWKVDLDALAQLPRVSN LDWDGRVLRMTRRTASGGEGVLVVAWTRRIDAAGGQWLRWQSPVLSTAADWNESWSRAALWAQNASTEDRAREVPVTPLE DWQLFYFRSDAWTNPQSSDGSRGTAMTPPAALQLVSQQTVVPDGIRLVLTLPPGQAISGKLTVDWVRPTFGSEKS >Mature_235_residues MQMHPTRTQVRSSGFTLIEMLVAITVMALLAVLSWRGLDGMARAQAQTSQRADEVLTLQAGLAQWKVDLDALAQLPRVSN LDWDGRVLRMTRRTASGGEGVLVVAWTRRIDAAGGQWLRWQSPVLSTAADWNESWSRAALWAQNASTEDRAREVPVTPLE DWQLFYFRSDAWTNPQSSDGSRGTAMTPPAALQLVSQQTVVPDGIRLVLTLPPGQAISGKLTVDWVRPTFGSEKS
Specific function: Unknown
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25911; Mature: 25911
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMHPTRTQVRSSGFTLIEMLVAITVMALLAVLSWRGLDGMARAQAQTSQRADEVLTLQA CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHH GLAQWKVDLDALAQLPRVSNLDWDGRVLRMTRRTASGGEGVLVVAWTRRIDAAGGQWLRW HHHHHEECHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCEEEE QSPVLSTAADWNESWSRAALWAQNASTEDRAREVPVTPLEDWQLFYFRSDAWTNPQSSDG CCCHHHHHHCCCCCHHHHHHEECCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC SRGTAMTPPAALQLVSQQTVVPDGIRLVLTLPPGQAISGKLTVDWVRPTFGSEKS CCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MQMHPTRTQVRSSGFTLIEMLVAITVMALLAVLSWRGLDGMARAQAQTSQRADEVLTLQA CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHH GLAQWKVDLDALAQLPRVSNLDWDGRVLRMTRRTASGGEGVLVVAWTRRIDAAGGQWLRW HHHHHEECHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCEEEE QSPVLSTAADWNESWSRAALWAQNASTEDRAREVPVTPLEDWQLFYFRSDAWTNPQSSDG CCCHHHHHHCCCCCHHHHHHEECCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC SRGTAMTPPAALQLVSQQTVVPDGIRLVLTLPPGQAISGKLTVDWVRPTFGSEKS CCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA