Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787218
Identifier: 91787218
GI number: 91787218
Start: 1361698
End: 1362087
Strand: Direct
Name: 91787218
Synonym: Bpro_1322
Alternate gene names: NA
Gene position: 1361698-1362087 (Clockwise)
Preceding gene: 91787217
Following gene: 91787219
Centisome position: 26.19
GC content: 69.23
Gene sequence:
>390_bases GTGGTGGTGGCCATCATGGCACTGGCCACGGCCGGCGTGACGCTGGCGCTGCGCGACAACGCCCAGACCACGCTGGAGCG CGAGGCGCTGCGGCTGGCGGTCCTGTTCGAGTCTGCCCGCGCGCAGTCGCGTGCAAACGGTGTAGCGGTGTACTGGCACG CGACTGCCGAGGGTTTTCGCTTCGAAGGCCTGCCGTCCGAGGCTTTACCCGGCAGGTGGCTGGCCGAAGGCACGATGGTT CGCGGCAGCCCCAGCGTGCAGCTCGGACCCGAGCCCATCATCGGCCCGCAGGCGGTGGAGCTTTTCAGCGTCAGCCAGTC TGATCGCACCCTGCGCGTAGCCACCGACGGGCTGCGTCCCTTTACTGTCCAGGGGCCGGTGCAGCCATGA
Upstream 100 bases:
>100_bases CAATAGCGATATTGCCTCCATTCCCGTCCCTGCACGTGCTGCCCCGGGAGCCCGTGCCCGCAATCTCCGCAACCGGGGAT TTACCTTGCTCGAACTCCTC
Downstream 100 bases:
>100_bases CGCCGCATCGGTCCTTGCCACGGTCACAGGCACGCCGTCCATCGGCGGGCTTCACGCTGATAGAAGTGCTGGTGGCCCTG GGCATTGTGGCGGTCGCCCT
Product: general secretion pathway protein H
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MVVAIMALATAGVTLALRDNAQTTLEREALRLAVLFESARAQSRANGVAVYWHATAEGFRFEGLPSEALPGRWLAEGTMV RGSPSVQLGPEPIIGPQAVELFSVSQSDRTLRVATDGLRPFTVQGPVQP
Sequences:
>Translated_129_residues MVVAIMALATAGVTLALRDNAQTTLEREALRLAVLFESARAQSRANGVAVYWHATAEGFRFEGLPSEALPGRWLAEGTMV RGSPSVQLGPEPIIGPQAVELFSVSQSDRTLRVATDGLRPFTVQGPVQP >Mature_129_residues MVVAIMALATAGVTLALRDNAQTTLEREALRLAVLFESARAQSRANGVAVYWHATAEGFRFEGLPSEALPGRWLAEGTMV RGSPSVQLGPEPIIGPQAVELFSVSQSDRTLRVATDGLRPFTVQGPVQP
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13771; Mature: 13771
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVAIMALATAGVTLALRDNAQTTLEREALRLAVLFESARAQSRANGVAVYWHATAEGFR CEEEEEEEHHCCEEEEEECCCCHHHHHHHHHHEEEHHHHHHHCCCCCEEEEEEECCCCEE FEGLPSEALPGRWLAEGTMVRGSPSVQLGPEPIIGPQAVELFSVSQSDRTLRVATDGLRP ECCCCCCCCCCCEECCCEEECCCCCCEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCE FTVQGPVQP EEECCCCCC >Mature Secondary Structure MVVAIMALATAGVTLALRDNAQTTLEREALRLAVLFESARAQSRANGVAVYWHATAEGFR CEEEEEEEHHCCEEEEEECCCCHHHHHHHHHHEEEHHHHHHHCCCCCEEEEEEECCCCEE FEGLPSEALPGRWLAEGTMVRGSPSVQLGPEPIIGPQAVELFSVSQSDRTLRVATDGLRP ECCCCCCCCCCCEECCCEEECCCCCCEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCE FTVQGPVQP EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA