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The map label for this gene is yjbC [C]

Identifier: 91787026

GI number: 91787026

Start: 1166974

End: 1167720

Strand: Direct

Name: yjbC [C]

Synonym: Bpro_1128

Alternate gene names: 91787026

Gene position: 1166974-1167720 (Clockwise)

Preceding gene: 91787025

Following gene: 91787028

Centisome position: 22.44

GC content: 63.72

Gene sequence:

>747_bases
ATGGAACCTGTACGCCTCGCCAAACGTCTTGCTGAAATGCTGTCCTGTTCGCGCCGCGAGGCAGAGCAGTACATCGAAGG
CGGCTGGGTCACGGTCGACGGCGTGGTGGTGGAAGAACCCCAGTTTCGCGTGCTGGACCAGACCATCGAATTGTCAAAAG
ACGCCAGTCTGCTGGCCCTCGCGCCGGTCACTTTGTTGCTGCACAAACCGGCGGGCCACGAGGCAGGGCTGGACGCACCG
GCAGGCCGCGGCGTTCCCTCTGCCGCCGAGCTTCTGGTTGCCGCCAACCAGTCGCCAGACGACCGGTCCGGCATTCGTCC
GCTCAAAAAACATTTTTCCGCCGCTGAACTGGTCACGCCTCTGGCCACGGCGGCCAGCGGGCTGGTGGTGTTCACCCAGG
ATTGGCGTGTGGCACGCAAGCTTCGCGAAGATGCCGGTGTGCTGGAGCACGAGGTGATTGTGGAGGTGACAGGAGAGATC
AAGCCCGGCGGCCTGGAGCGCCTGAATCGCATTGATCACGGTTTCACCTTCAACGGCGTACTGCTGCCGCCGGCCAAGGT
GAGCTGGCAAAGCGAGGCGCGCCTGCGTTTCGCGCTCAAGGGCGAGCGGCCCGGGCAGATTGCCTACATGTGCGAAAGCG
TCGGGCTCAGGGTGGAGGCCATGAAGCGCCTGCGCATTGGCCGAGTTCCCATGAGTAACCTGCAGTCCGGCCGATGGCGC
TACCTGTTGCCCCATGAGCGGTTTTGA

Upstream 100 bases:

>100_bases
AGCCTCTTGCCATGGTCGTCGCGGAACGAGGGCCGAAAGCTGATTTTTGATGGCCATCGGGCGCTACCCGCCCACCGTAC
TCACCGGGACTTTTTTTTCC

Downstream 100 bases:

>100_bases
GGCGGGGGAGGGTGTTGTTCAGGGGCCGATCACGCCCGGAAACGCCCAGATCAAACTGCCCGTCATCAAAAAGTAGCGCG
CAAATTTGCCGATCACCATG

Product: RNA-binding S4

Products: NA

Alternate protein names: Pseudouridine Synthase Rsu; Ribosomal Large Subunit Pseudouridine Synthase F; Pseudouridylate Synthase; RNA Pseudouridylate Synthase; S4 Domain-Containing Protein; Pseudouridine Synthase Family Protein; Ribosomal Small Subunit Pseudouridylate Synthase; RNA Pseudouridylate Synthase Family Protein; Pseudouridylate Synthase Protein; RNA Pseudouridine Synthase Family Protein; Ribosomal Large Subunit Pseudouridine Synthase; 23S RRNA Pseudouridine; Arginine/Proline Rich Protein; Propable; 16S Pseudouridylate Synthase

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MEPVRLAKRLAEMLSCSRREAEQYIEGGWVTVDGVVVEEPQFRVLDQTIELSKDASLLALAPVTLLLHKPAGHEAGLDAP
AGRGVPSAAELLVAANQSPDDRSGIRPLKKHFSAAELVTPLATAASGLVVFTQDWRVARKLREDAGVLEHEVIVEVTGEI
KPGGLERLNRIDHGFTFNGVLLPPAKVSWQSEARLRFALKGERPGQIAYMCESVGLRVEAMKRLRIGRVPMSNLQSGRWR
YLLPHERF

Sequences:

>Translated_248_residues
MEPVRLAKRLAEMLSCSRREAEQYIEGGWVTVDGVVVEEPQFRVLDQTIELSKDASLLALAPVTLLLHKPAGHEAGLDAP
AGRGVPSAAELLVAANQSPDDRSGIRPLKKHFSAAELVTPLATAASGLVVFTQDWRVARKLREDAGVLEHEVIVEVTGEI
KPGGLERLNRIDHGFTFNGVLLPPAKVSWQSEARLRFALKGERPGQIAYMCESVGLRVEAMKRLRIGRVPMSNLQSGRWR
YLLPHERF
>Mature_248_residues
MEPVRLAKRLAEMLSCSRREAEQYIEGGWVTVDGVVVEEPQFRVLDQTIELSKDASLLALAPVTLLLHKPAGHEAGLDAP
AGRGVPSAAELLVAANQSPDDRSGIRPLKKHFSAAELVTPLATAASGLVVFTQDWRVARKLREDAGVLEHEVIVEVTGEI
KPGGLERLNRIDHGFTFNGVLLPPAKVSWQSEARLRFALKGERPGQIAYMCESVGLRVEAMKRLRIGRVPMSNLQSGRWR
YLLPHERF

Specific function: Unknown

COG id: COG1187

COG function: function code J; 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27367; Mature: 27367

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPVRLAKRLAEMLSCSRREAEQYIEGGWVTVDGVVVEEPQFRVLDQTIELSKDASLLAL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCCHHHHHHHHHHCCCCCCHHH
APVTLLLHKPAGHEAGLDAPAGRGVPSAAELLVAANQSPDDRSGIRPLKKHFSAAELVTP
HHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHCCHHHHHHH
LATAASGLVVFTQDWRVARKLREDAGVLEHEVIVEVTGEIKPGGLERLNRIDHGFTFNGV
HHHHHCCEEEEECCHHHHHHHHHHCCCHHEEEEEEEECCCCCCHHHHHHHHCCCCEECCE
LLPPAKVSWQSEARLRFALKGERPGQIAYMCESVGLRVEAMKRLRIGRVPMSNLQSGRWR
EECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCCCEE
YLLPHERF
EECCCCCC
>Mature Secondary Structure
MEPVRLAKRLAEMLSCSRREAEQYIEGGWVTVDGVVVEEPQFRVLDQTIELSKDASLLAL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCCHHHHHHHHHHCCCCCCHHH
APVTLLLHKPAGHEAGLDAPAGRGVPSAAELLVAANQSPDDRSGIRPLKKHFSAAELVTP
HHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHCCHHHHHHH
LATAASGLVVFTQDWRVARKLREDAGVLEHEVIVEVTGEIKPGGLERLNRIDHGFTFNGV
HHHHHCCEEEEECCHHHHHHHHHHCCCHHEEEEEEEECCCCCCHHHHHHHHCCCCEECCE
LLPPAKVSWQSEARLRFALKGERPGQIAYMCESVGLRVEAMKRLRIGRVPMSNLQSGRWR
EECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCCCEE
YLLPHERF
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA