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The map label for this gene is xerC [H]

Identifier: 91786958

GI number: 91786958

Start: 1087296

End: 1088372

Strand: Direct

Name: xerC [H]

Synonym: Bpro_1060

Alternate gene names: 91786958

Gene position: 1087296-1088372 (Clockwise)

Preceding gene: 91786957

Following gene: 91786960

Centisome position: 20.91

GC content: 68.99

Gene sequence:

>1077_bases
ATGACGCAGCGGCCGCCAATTGCGTCCGGAGTTCCTGAAGACAGACCGGCGTCCGTGCCCGAATCGCACCCGTTGGTGGA
GCGTTACCTGGAGCATGTGCGCGTTGAAAAACGCCTGGCGTCGCGCACGGTGGAGCTGTACGCGCTGGACCTGCACAAGC
TGGAGGCCAACGCCCGCCAGGCCGGCGTCGCGCTGACCGAGGTGCACAGCACCCACATGCGGCGTTGGGTCGCGCAGATG
CATGGCGCCGGGCGCAGCGGCCGCGGGATCGCACTTATTTTGTCGGGCTGGCGCGGCTTTTACGCCTGGCTGGGCCGTGA
AGGCCTGGTGCCCGCCAACCCGGTGCAGGACGTGCGCTCGCCCAAGGTCGCCAAGCCCCTGCCAAAGGCCCTGAGCGTGG
ACGAGGCGGTGCAGCTGGCCAGCTACCAGTCGGATGACGAGGATGATCCGCACCTGGAAGCGCGTGACCAGTGCATCACG
GAGTTGCTCTATGGCTGCGGGCTGCGCATTGGCGAACTGGTGGGGCTGGATGTGCGCGCCAGCGCGCAGGCGCGCGGCTG
GGTGGACATGGATGCCGCCGAGGCCCATGTGCTTGGCAAGGGCTCGAAGCGGCGCAGCGTGCCGGTCGGCCGCCAGGCAC
TGCAGGCGCTGCATGCCTGGCTCGCCCTGCGCGGTGACTGGGCCGGCGAGGGCGCGGCCGCCGAAGGGGCAGCCGGCCAG
GCGCTTTTCATCAGTCAGCGCGGCGCGCGGCTCACGCCCCAGCACATCCGCCTGCGCCTGAAGCGGCGTTCACTCAAGGC
CGGGCTGGCCACCCCGGTGCATCCGCACATGCTGCGCCATTCGTTTGCCAGTCATGTGCTGCAGTCCAGCGGTGATCTGC
GCGCGGTGCAGGAGCTGCTGGGCCACGCCAACATCACGACGACGCAGGTTTACACGCGGCTTGATTTTCAGCATCTGGCC
AAGGTGTATGACGCCGCCCATCCGCGCGCTACATCGGCCGGCGTGGCTTCGCGGGCTGTCCCGCTGCCCGCAACAGCTCC
CGCCCCGGCGGTGGTGAAGGTCAAGTCCAAACCGTGA

Upstream 100 bases:

>100_bases
CGGCATGGGCACCGACTTCCTGGAGCGCCTGGGCGAGTTGGCGGGCGCCGCGCTCTCGCGTCTGCGGGCCCAGCCGACCG
GCACACCCTGAGCACGCGCC

Downstream 100 bases:

>100_bases
ACCAGGGGTGGGGTGCGGGCCCGACAAGCCATGAGCCAGTCCTGAGCTACTGAGCTCCCTGAACCGCCCGCGCCCCTGGC
TTGATTTGCCCGCCCTTGCG

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTQRPPIASGVPEDRPASVPESHPLVERYLEHVRVEKRLASRTVELYALDLHKLEANARQAGVALTEVHSTHMRRWVAQM
HGAGRSGRGIALILSGWRGFYAWLGREGLVPANPVQDVRSPKVAKPLPKALSVDEAVQLASYQSDDEDDPHLEARDQCIT
ELLYGCGLRIGELVGLDVRASAQARGWVDMDAAEAHVLGKGSKRRSVPVGRQALQALHAWLALRGDWAGEGAAAEGAAGQ
ALFISQRGARLTPQHIRLRLKRRSLKAGLATPVHPHMLRHSFASHVLQSSGDLRAVQELLGHANITTTQVYTRLDFQHLA
KVYDAAHPRATSAGVASRAVPLPATAPAPAVVKVKSKP

Sequences:

>Translated_358_residues
MTQRPPIASGVPEDRPASVPESHPLVERYLEHVRVEKRLASRTVELYALDLHKLEANARQAGVALTEVHSTHMRRWVAQM
HGAGRSGRGIALILSGWRGFYAWLGREGLVPANPVQDVRSPKVAKPLPKALSVDEAVQLASYQSDDEDDPHLEARDQCIT
ELLYGCGLRIGELVGLDVRASAQARGWVDMDAAEAHVLGKGSKRRSVPVGRQALQALHAWLALRGDWAGEGAAAEGAAGQ
ALFISQRGARLTPQHIRLRLKRRSLKAGLATPVHPHMLRHSFASHVLQSSGDLRAVQELLGHANITTTQVYTRLDFQHLA
KVYDAAHPRATSAGVASRAVPLPATAPAPAVVKVKSKP
>Mature_357_residues
TQRPPIASGVPEDRPASVPESHPLVERYLEHVRVEKRLASRTVELYALDLHKLEANARQAGVALTEVHSTHMRRWVAQMH
GAGRSGRGIALILSGWRGFYAWLGREGLVPANPVQDVRSPKVAKPLPKALSVDEAVQLASYQSDDEDDPHLEARDQCITE
LLYGCGLRIGELVGLDVRASAQARGWVDMDAAEAHVLGKGSKRRSVPVGRQALQALHAWLALRGDWAGEGAAAEGAAGQA
LFISQRGARLTPQHIRLRLKRRSLKAGLATPVHPHMLRHSFASHVLQSSGDLRAVQELLGHANITTTQVYTRLDFQHLAK
VYDAAHPRATSAGVASRAVPLPATAPAPAVVKVKSKP

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4973

COG function: function code L; Site-specific recombinase XerC

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=313, Percent_Identity=41.85303514377, Blast_Score=235, Evalue=3e-63,
Organism=Escherichia coli, GI1789261, Length=306, Percent_Identity=34.3137254901961, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1790768, Length=164, Percent_Identity=32.9268292682927, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1790767, Length=182, Percent_Identity=30.2197802197802, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 38819; Mature: 38688

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRPPIASGVPEDRPASVPESHPLVERYLEHVRVEKRLASRTVELYALDLHKLEANARQ
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
AGVALTEVHSTHMRRWVAQMHGAGRSGRGIALILSGWRGFYAWLGREGLVPANPVQDVRS
HCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCHHHHCC
PKVAKPLPKALSVDEAVQLASYQSDDEDDPHLEARDQCITELLYGCGLRIGELVGLDVRA
CCCCCCCHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
SAQARGWVDMDAAEAHVLGKGSKRRSVPVGRQALQALHAWLALRGDWAGEGAAAEGAAGQ
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ALFISQRGARLTPQHIRLRLKRRSLKAGLATPVHPHMLRHSFASHVLQSSGDLRAVQELL
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
GHANITTTQVYTRLDFQHLAKVYDAAHPRATSAGVASRAVPLPATAPAPAVVKVKSKP
CCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
TQRPPIASGVPEDRPASVPESHPLVERYLEHVRVEKRLASRTVELYALDLHKLEANARQ
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
AGVALTEVHSTHMRRWVAQMHGAGRSGRGIALILSGWRGFYAWLGREGLVPANPVQDVRS
HCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCHHHHCC
PKVAKPLPKALSVDEAVQLASYQSDDEDDPHLEARDQCITELLYGCGLRIGELVGLDVRA
CCCCCCCHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
SAQARGWVDMDAAEAHVLGKGSKRRSVPVGRQALQALHAWLALRGDWAGEGAAAEGAAGQ
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ALFISQRGARLTPQHIRLRLKRRSLKAGLATPVHPHMLRHSFASHVLQSSGDLRAVQELL
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
GHANITTTQVYTRLDFQHLAKVYDAAHPRATSAGVASRAVPLPATAPAPAVVKVKSKP
CCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA