Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786957
Identifier: 91786957
GI number: 91786957
Start: 1086591
End: 1087286
Strand: Direct
Name: 91786957
Synonym: Bpro_1059
Alternate gene names: NA
Gene position: 1086591-1087286 (Clockwise)
Preceding gene: 91786956
Following gene: 91786958
Centisome position: 20.89
GC content: 64.94
Gene sequence:
>696_bases ATGACTCCAACTGAACATCCCATCACCGAAGACGACATCGCCAATTTCCTGGCCAACACGCCCGACTTCTTCGAGCGTCA TGCGGAACTGCTGGCATCGGTGCAGCTCTCCAGTGGCCACGGCAACCGCGCCGTCAGCCTGCAGGAGCGCCAGGCCGGCA TGTTGCGCGAGAAGATCAAGGGCCTGGAGACCAAGGTGGTCGAGATGATTCGCCACGGCCAGGACAATGTGCTGATCGCC GACAAGATGCAGCGCTGGACGTGCAAGCTGCTGCAGACAGCGCAGGCGCGCGACCTGCCCGGCACCATGGTGGAAGGCAT CACCACCGGGTTCCAGATCCCGCAGGCCGCCATCAAGGTCTGGGGTGTCAATGGCATTTTCTCGGACGAAAGCTTTGCAA CCGGCGTCAGTGAGGATGCCCAGACCTTCGCCTCCTCGTTGACCACGCCGTACTGCGGTGTCAATTCCGGTTTTGAAGCG GTCAACTGGCTGCCCGAACCTGCGATGGCGCTGTCGATTGCCCTGATTCCGCTGCGCGCGGCCGCCGGCGCCCAGGCTTC GGGCCTGCTGGTGCTGGCCTCGTCCGATCCCGAGCGCTTTCACAGCGGCATGGGCACCGACTTCCTGGAGCGCCTGGGCG AGTTGGCGGGCGCCGCGCTCTCGCGTCTGCGGGCCCAGCCGACCGGCACACCCTGA
Upstream 100 bases:
>100_bases GCGAAGCGTCTCGCGAGCCGCGGCCTGCAAGGCCTCGGGAGTTACACGAAGTGAACGACCGTGGGGGCCTATTTCTCGCC TATTTCCCTACAATGCCGAC
Downstream 100 bases:
>100_bases GCACGCGCCATGACGCAGCGGCCGCCAATTGCGTCCGGAGTTCCTGAAGACAGACCGGCGTCCGTGCCCGAATCGCACCC GTTGGTGGAGCGTTACCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: 3 5'-Cyclic-Nucleotide Phosphodiesterase
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTPTEHPITEDDIANFLANTPDFFERHAELLASVQLSSGHGNRAVSLQERQAGMLREKIKGLETKVVEMIRHGQDNVLIA DKMQRWTCKLLQTAQARDLPGTMVEGITTGFQIPQAAIKVWGVNGIFSDESFATGVSEDAQTFASSLTTPYCGVNSGFEA VNWLPEPAMALSIALIPLRAAAGAQASGLLVLASSDPERFHSGMGTDFLERLGELAGAALSRLRAQPTGTP
Sequences:
>Translated_231_residues MTPTEHPITEDDIANFLANTPDFFERHAELLASVQLSSGHGNRAVSLQERQAGMLREKIKGLETKVVEMIRHGQDNVLIA DKMQRWTCKLLQTAQARDLPGTMVEGITTGFQIPQAAIKVWGVNGIFSDESFATGVSEDAQTFASSLTTPYCGVNSGFEA VNWLPEPAMALSIALIPLRAAAGAQASGLLVLASSDPERFHSGMGTDFLERLGELAGAALSRLRAQPTGTP >Mature_230_residues TPTEHPITEDDIANFLANTPDFFERHAELLASVQLSSGHGNRAVSLQERQAGMLREKIKGLETKVVEMIRHGQDNVLIAD KMQRWTCKLLQTAQARDLPGTMVEGITTGFQIPQAAIKVWGVNGIFSDESFATGVSEDAQTFASSLTTPYCGVNSGFEAV NWLPEPAMALSIALIPLRAAAGAQASGLLVLASSDPERFHSGMGTDFLERLGELAGAALSRLRAQPTGTP
Specific function: Unknown
COG id: COG3159
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24777; Mature: 24646
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTEHPITEDDIANFLANTPDFFERHAELLASVQLSSGHGNRAVSLQERQAGMLREKIK CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH GLETKVVEMIRHGQDNVLIADKMQRWTCKLLQTAQARDLPGTMVEGITTGFQIPQAAIKV HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHH WGVNGIFSDESFATGVSEDAQTFASSLTTPYCGVNSGFEAVNWLPEPAMALSIALIPLRA HCCCCEECCCHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH AAGAQASGLLVLASSDPERFHSGMGTDFLERLGELAGAALSRLRAQPTGTP HCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPTEHPITEDDIANFLANTPDFFERHAELLASVQLSSGHGNRAVSLQERQAGMLREKIK CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH GLETKVVEMIRHGQDNVLIADKMQRWTCKLLQTAQARDLPGTMVEGITTGFQIPQAAIKV HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHH WGVNGIFSDESFATGVSEDAQTFASSLTTPYCGVNSGFEAVNWLPEPAMALSIALIPLRA HCCCCEECCCHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH AAGAQASGLLVLASSDPERFHSGMGTDFLERLGELAGAALSRLRAQPTGTP HCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA