Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is braC [H]
Identifier: 91786926
GI number: 91786926
Start: 1053873
End: 1055027
Strand: Direct
Name: braC [H]
Synonym: Bpro_1027
Alternate gene names: 91786926
Gene position: 1053873-1055027 (Clockwise)
Preceding gene: 91786924
Following gene: 91786930
Centisome position: 20.27
GC content: 61.9
Gene sequence:
>1155_bases ATGACCTTCAAGCGCAGAGCCATGATCGCCACGGCAGCGGCCTCGGCCCTTTTTCTCAGCCCTCAACTGTGGGCGCAGGC CCAGCCCATCAAAATCTTCAACGTGGTCGAGCTCTCCGGCACCGGGGCAACGGCAGGCACCATGTTCAAGTCCGGCATTG AACTGGCGGTCAAGGACGTCAATGCCTCCGGCGGCATCCTGGGGCGCAAGCTTGAGGTGACCAACATGGACACCCAGACC AATCCCGGCATTGCCAAGGCGCTGGTGGTACGCGCCATTGATGACGGCGCGTTTGCCATCTTCGGCCCTGTCTTCAGCGG CTCCATCCTGATCAGCCAGACCGAGACGCGGCGTGCCGAGGTGCCCAATTTCACGGCCGCTGCCGGGGCCCTGGTGACCC AGCAGGGCAGCCCCTATATCTTTCGCACCGGGCTGACCCAGGTCAACAGCATGCCCAAGGCCGCACGCTACATCGCCCGA AACCTGAAGATCAAGAAAATCGCCGTGCTGTTCGTCAACAACGACTTCGGCAAACCCGGGCGCGACGCCATCGTCGGTGC CCTGAAAACCTTTGGTGTGGAGGTGGTGGCGGACATTTCCACCGAAGCCGGCCAGCTCGATTTCTCCGCGCCCATCATCA AGGTGAAGCAGGCCGGCGCCGAGGCGGTGTTTGTCTATCTGAACGAAGAAGAGTCGGCACGGGCGGTGCGCGAACTGCGC AAGCAAGGTTGGGACAAGCCCATCGTGGGCGACGTGACGCTGCTGAGCCAGAAGGTGATCGATTTGGCGGGCGACGCGGC CAACGGCGTGGTCGGGCACTCCGAAATGTCGGCCGACGCGCCGATTGCCGGCGTGAAAGTGGTGCGCGACAAGTTCTTCA AGGAATACAACTTCCTGCCCGACCACAACGGCATCAAGGGCTACCAGGGTGTTTACATGCTCAAGGCGGCGATCCAGAAA GTCGGCAAGTTCGACCGCGTGGCGGTGGCCAAACAGTTGCACGGCATGACCATCAAGGTGGCGGACGAACCCGGCGTGCT GATGGATGTCACCTTCGATGACAAGGGCGACATCGACCGCGAGAGCTTCCTCATCGAGATCAAGGGCGGCAAACCCGTGG TCAAGGAAGTCCTGCCGCCTCTGGGCAAGAACTGA
Upstream 100 bases:
>100_bases CCGAGTACTGTACACTATTGTCGCGAGGCCGGTATAAGCTTTCATTTCAGCCTTCATTTCCGGCACTCCGATAACTTTCA GACCCTCAATGGAGACAAGC
Downstream 100 bases:
>100_bases AAATTTGTAACTACTCAGTCCTTCCTGTCTTTGGGGCTGAGGCCCGCGGCTCCGAGTCCGCCTGCGCGGACTTGGACGGG GCGAAGAGTCGCAGTGTCTC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTFKRRAMIATAAASALFLSPQLWAQAQPIKIFNVVELSGTGATAGTMFKSGIELAVKDVNASGGILGRKLEVTNMDTQT NPGIAKALVVRAIDDGAFAIFGPVFSGSILISQTETRRAEVPNFTAAAGALVTQQGSPYIFRTGLTQVNSMPKAARYIAR NLKIKKIAVLFVNNDFGKPGRDAIVGALKTFGVEVVADISTEAGQLDFSAPIIKVKQAGAEAVFVYLNEEESARAVRELR KQGWDKPIVGDVTLLSQKVIDLAGDAANGVVGHSEMSADAPIAGVKVVRDKFFKEYNFLPDHNGIKGYQGVYMLKAAIQK VGKFDRVAVAKQLHGMTIKVADEPGVLMDVTFDDKGDIDRESFLIEIKGGKPVVKEVLPPLGKN
Sequences:
>Translated_384_residues MTFKRRAMIATAAASALFLSPQLWAQAQPIKIFNVVELSGTGATAGTMFKSGIELAVKDVNASGGILGRKLEVTNMDTQT NPGIAKALVVRAIDDGAFAIFGPVFSGSILISQTETRRAEVPNFTAAAGALVTQQGSPYIFRTGLTQVNSMPKAARYIAR NLKIKKIAVLFVNNDFGKPGRDAIVGALKTFGVEVVADISTEAGQLDFSAPIIKVKQAGAEAVFVYLNEEESARAVRELR KQGWDKPIVGDVTLLSQKVIDLAGDAANGVVGHSEMSADAPIAGVKVVRDKFFKEYNFLPDHNGIKGYQGVYMLKAAIQK VGKFDRVAVAKQLHGMTIKVADEPGVLMDVTFDDKGDIDRESFLIEIKGGKPVVKEVLPPLGKN >Mature_383_residues TFKRRAMIATAAASALFLSPQLWAQAQPIKIFNVVELSGTGATAGTMFKSGIELAVKDVNASGGILGRKLEVTNMDTQTN PGIAKALVVRAIDDGAFAIFGPVFSGSILISQTETRRAEVPNFTAAAGALVTQQGSPYIFRTGLTQVNSMPKAARYIARN LKIKKIAVLFVNNDFGKPGRDAIVGALKTFGVEVVADISTEAGQLDFSAPIIKVKQAGAEAVFVYLNEEESARAVRELRK QGWDKPIVGDVTLLSQKVIDLAGDAANGVVGHSEMSADAPIAGVKVVRDKFFKEYNFLPDHNGIKGYQGVYMLKAAIQKV GKFDRVAVAKQLHGMTIKVADEPGVLMDVTFDDKGDIDRESFLIEIKGGKPVVKEVLPPLGKN
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=367, Percent_Identity=26.158038147139, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789867, Length=360, Percent_Identity=27.5, Blast_Score=89, Evalue=4e-19,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41080; Mature: 40949
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKRRAMIATAAASALFLSPQLWAQAQPIKIFNVVELSGTGATAGTMFKSGIELAVKDV CCCCHHHHHHHHHHHHHEECHHHHCCCCCEEEEEEEEECCCCCCHHHHHHCCCEEEEEEC NASGGILGRKLEVTNMDTQTNPGIAKALVVRAIDDGAFAIFGPVFSGSILISQTETRRAE CCCCCEEEEEEEEECCCCCCCCCHHHEEEEEEECCCCEEEEECCCCCEEEEEECCCHHCC VPNFTAAAGALVTQQGSPYIFRTGLTQVNSMPKAARYIARNLKIKKIAVLFVNNDFGKPG CCCCHHHCCEEEECCCCCEEEECCCHHHHCCHHHHHHHHHCCEEEEEEEEEEECCCCCCC RDAIVGALKTFGVEVVADISTEAGQLDFSAPIIKVKQAGAEAVFVYLNEEESARAVRELR HHHHHHHHHHCCEEEEEECCCCCCCEECCCCEEEEECCCCEEEEEEECCCHHHHHHHHHH KQGWDKPIVGDVTLLSQKVIDLAGDAANGVVGHSEMSADAPIAGVKVVRDKFFKEYNFLP HCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC DHNGIKGYQGVYMLKAAIQKVGKFDRVAVAKQLHGMTIKVADEPGVLMDVTFDDKGDIDR CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCC ESFLIEIKGGKPVVKEVLPPLGKN CEEEEEECCCCCHHHHHCCCCCCC >Mature Secondary Structure TFKRRAMIATAAASALFLSPQLWAQAQPIKIFNVVELSGTGATAGTMFKSGIELAVKDV CCCHHHHHHHHHHHHHEECHHHHCCCCCEEEEEEEEECCCCCCHHHHHHCCCEEEEEEC NASGGILGRKLEVTNMDTQTNPGIAKALVVRAIDDGAFAIFGPVFSGSILISQTETRRAE CCCCCEEEEEEEEECCCCCCCCCHHHEEEEEEECCCCEEEEECCCCCEEEEEECCCHHCC VPNFTAAAGALVTQQGSPYIFRTGLTQVNSMPKAARYIARNLKIKKIAVLFVNNDFGKPG CCCCHHHCCEEEECCCCCEEEECCCHHHHCCHHHHHHHHHCCEEEEEEEEEEECCCCCCC RDAIVGALKTFGVEVVADISTEAGQLDFSAPIIKVKQAGAEAVFVYLNEEESARAVRELR HHHHHHHHHHCCEEEEEECCCCCCCEECCCCEEEEECCCCEEEEEEECCCHHHHHHHHHH KQGWDKPIVGDVTLLSQKVIDLAGDAANGVVGHSEMSADAPIAGVKVVRDKFFKEYNFLP HCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC DHNGIKGYQGVYMLKAAIQKVGKFDRVAVAKQLHGMTIKVADEPGVLMDVTFDDKGDIDR CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCC ESFLIEIKGGKPVVKEVLPPLGKN CEEEEEECCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]