Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786924
Identifier: 91786924
GI number: 91786924
Start: 1051461
End: 1052243
Strand: Direct
Name: 91786924
Synonym: Bpro_1025
Alternate gene names: NA
Gene position: 1051461-1052243 (Clockwise)
Preceding gene: 91786923
Following gene: 91786926
Centisome position: 20.22
GC content: 61.81
Gene sequence:
>783_bases ATGGACCACAAACCGCGCGTTGCCCTGCTGATTGACGCCGACAATTCACCGGCGTCCAAAATAGACCTGATCCTCAACGA GTTGTCGACCTTTGGCGAGACCAATATTCGCCGTGCTTACGGCAACTGGAAAAAGAGCGAACTCAAGGGCTGGGAAGAAG CGCTGCATGAGCATGCCATTCGCCCCATGCAGCAGTTTGACTACAGCAAAGGCAAAAACGCCAGCGACATGGCCATGGTG ATTGACGCGCTGGAGCTGCTCTACACCGACCGGCCCGATGCCTTTGGCATTGTGTCGTCCGATGCCGACTTCACGCCGCT GGTGATGCACCTGCGTGCCAAGGGCGCGGCCGTTTACGGGTTTGGCGCGCAGAAGACGCCCGAACCTTTTGTGAACGCAT GTTCGAAGTTCCTGTTCCTGGATAAATTGCGTCCCCTGGCCATGGGCGATGCCGCAGGCGGCGCTGCCGGGGACACCCGC GATGACGGCGAGGCGGTGACTGCGGCCCCCTTGCGTGCCACGCCGGCGCAGCTCAAGCAGGACGCCAAGCTCGTCATGCT GCTGCGCAATGCCGTGCAGGCGGCGGCCGATGACGAGGGCTGGGCGCGCGTGGGAGCGGTAGGCACCCAGATCGCCAACC AGGCCTCGTTTGACCATCGCAACTATGGTTATGCGACGCTGACCAAACTGCTGGTCGCCACGCAGCTGTTTGAAATCGCC GACGAAGGCAAGTCCACCGTGGCAGTGCGCGACAAGCGGCTGAACAAAACGGCCCGGGCCTGA
Upstream 100 bases:
>100_bases GGCGGCCCCCCGAGAGTTATGCGTTTGGCGAGGCTGAACTCAAGCCGCTGCGCTCGGGTGAAAGCCTGCCATGGAAGCTT TACTCCACCCGGAGCGAATG
Downstream 100 bases:
>100_bases GGTTGAGCCGGGTGAGGCTGCAGGGCGTGGATCACCCCGCAGCTGTTTCAAATCACTTTGCCCGGATTCAAAATGTTCTT CGGGTCCAGCGCCGCTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MDHKPRVALLIDADNSPASKIDLILNELSTFGETNIRRAYGNWKKSELKGWEEALHEHAIRPMQQFDYSKGKNASDMAMV IDALELLYTDRPDAFGIVSSDADFTPLVMHLRAKGAAVYGFGAQKTPEPFVNACSKFLFLDKLRPLAMGDAAGGAAGDTR DDGEAVTAAPLRATPAQLKQDAKLVMLLRNAVQAAADDEGWARVGAVGTQIANQASFDHRNYGYATLTKLLVATQLFEIA DEGKSTVAVRDKRLNKTARA
Sequences:
>Translated_260_residues MDHKPRVALLIDADNSPASKIDLILNELSTFGETNIRRAYGNWKKSELKGWEEALHEHAIRPMQQFDYSKGKNASDMAMV IDALELLYTDRPDAFGIVSSDADFTPLVMHLRAKGAAVYGFGAQKTPEPFVNACSKFLFLDKLRPLAMGDAAGGAAGDTR DDGEAVTAAPLRATPAQLKQDAKLVMLLRNAVQAAADDEGWARVGAVGTQIANQASFDHRNYGYATLTKLLVATQLFEIA DEGKSTVAVRDKRLNKTARA >Mature_260_residues MDHKPRVALLIDADNSPASKIDLILNELSTFGETNIRRAYGNWKKSELKGWEEALHEHAIRPMQQFDYSKGKNASDMAMV IDALELLYTDRPDAFGIVSSDADFTPLVMHLRAKGAAVYGFGAQKTPEPFVNACSKFLFLDKLRPLAMGDAAGGAAGDTR DDGEAVTAAPLRATPAQLKQDAKLVMLLRNAVQAAADDEGWARVGAVGTQIANQASFDHRNYGYATLTKLLVATQLFEIA DEGKSTVAVRDKRLNKTARA
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28266; Mature: 28266
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHKPRVALLIDADNSPASKIDLILNELSTFGETNIRRAYGNWKKSELKGWEEALHEHAI CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHC RPMQQFDYSKGKNASDMAMVIDALELLYTDRPDAFGIVSSDADFTPLVMHLRAKGAAVYG CHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCEEEE FGAQKTPEPFVNACSKFLFLDKLRPLAMGDAAGGAAGDTRDDGEAVTAAPLRATPAQLKQ CCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH DAKLVMLLRNAVQAAADDEGWARVGAVGTQIANQASFDHRNYGYATLTKLLVATQLFEIA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH DEGKSTVAVRDKRLNKTARA HCCCCEEEHHHHHHHHHCCC >Mature Secondary Structure MDHKPRVALLIDADNSPASKIDLILNELSTFGETNIRRAYGNWKKSELKGWEEALHEHAI CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHC RPMQQFDYSKGKNASDMAMVIDALELLYTDRPDAFGIVSSDADFTPLVMHLRAKGAAVYG CHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCEEEE FGAQKTPEPFVNACSKFLFLDKLRPLAMGDAAGGAAGDTRDDGEAVTAAPLRATPAQLKQ CCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH DAKLVMLLRNAVQAAADDEGWARVGAVGTQIANQASFDHRNYGYATLTKLLVATQLFEIA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH DEGKSTVAVRDKRLNKTARA HCCCCEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA