Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786930
Identifier: 91786930
GI number: 91786930
Start: 1057551
End: 1058354
Strand: Direct
Name: 91786930
Synonym: Bpro_1031
Alternate gene names: NA
Gene position: 1057551-1058354 (Clockwise)
Preceding gene: 91786926
Following gene: 91786931
Centisome position: 20.34
GC content: 64.68
Gene sequence:
>804_bases ATGCCTGACGCCGTGAGCCCGCTGGTCGCCATCGACTGGTCCCAACCCTGGTTTGCGCCCCTGCGCCGTGCGGGCGAGGC GGCCGGTGCGCTGGCGCTGCGGGGCGCCGGTGTCGCACAAGCCCTCAATGCTGTGGCCCAGACGCATGGCGTGGCGGCTG CGAATACGAATGCCACCCGGGCGGGCGATGAGGGGCATTGCCCGGTGCGCTTTGTGCCGCAGGGCGAATTGCCGCCCGGC GAGGCCTACGAGCGCTATATCTTCAACACACGCCATTGCCCGACGCGCGACGGGCTGCACGACTTCTTCAATGGCCTGTG CTGGCTGCAGTTTCCCGAGACCAAGACCCGGCTCAACCAGCTGCAGGCTGCCGAGATAGCGTCGGCGGGCATCCGGCCGG TGCGCGGCCCGGTGCGCGATGCGCTGACGCTGTTTGATGAAAACGCCGCCTTCCTGCTGGCGCCGCAAGCCCTGTGGGAC GCCCTGATCGCCCGGGACTGGCAGCAACTCTTCATCGGCTTGCGCCCGCTGTGGGCTGACACGCAACTGGTGCTTTTTGG CCATGCCTTGCTCGAAAAGCTGGTTTATCCACGAAAACCGATCACGGCCCATGTATACCGGGCGCAGCCAGCTATTGATT CAATAGCAGAGCTGGATGCCTGGGTGGCTGCTGATTTGAGCGCCGACAAACTGGCCGGCAAGCCCTTTGCACCCTTGCCG GTACTGGGCGTGCCGGGCTGGTGGCCGGAAAACGAGAACTTTTCCTTTTATGATGACTCCCTTGTATTCCGTCCACGCAG GTAG
Upstream 100 bases:
>100_bases GTAAGGTTCTGTATGCAAGATGAAGAGAGGGCTATTGTCGGTGCAGGGAGCCAGGCGCCAGGGCGATGCTGCGGGCGTTG CGGCGTGATGCGGAGCCCCC
Downstream 100 bases:
>100_bases AAAACAACACATAAAAAATCCTGCGCCGGCAGCCGGCCCGAACGGCTTGATTTGGGAGGAAGCCCCCCAATTTGTCCGGA ACGCAACTCTCACGGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Putative Transmembrane Protein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPDAVSPLVAIDWSQPWFAPLRRAGEAAGALALRGAGVAQALNAVAQTHGVAAANTNATRAGDEGHCPVRFVPQGELPPG EAYERYIFNTRHCPTRDGLHDFFNGLCWLQFPETKTRLNQLQAAEIASAGIRPVRGPVRDALTLFDENAAFLLAPQALWD ALIARDWQQLFIGLRPLWADTQLVLFGHALLEKLVYPRKPITAHVYRAQPAIDSIAELDAWVAADLSADKLAGKPFAPLP VLGVPGWWPENENFSFYDDSLVFRPRR
Sequences:
>Translated_267_residues MPDAVSPLVAIDWSQPWFAPLRRAGEAAGALALRGAGVAQALNAVAQTHGVAAANTNATRAGDEGHCPVRFVPQGELPPG EAYERYIFNTRHCPTRDGLHDFFNGLCWLQFPETKTRLNQLQAAEIASAGIRPVRGPVRDALTLFDENAAFLLAPQALWD ALIARDWQQLFIGLRPLWADTQLVLFGHALLEKLVYPRKPITAHVYRAQPAIDSIAELDAWVAADLSADKLAGKPFAPLP VLGVPGWWPENENFSFYDDSLVFRPRR >Mature_266_residues PDAVSPLVAIDWSQPWFAPLRRAGEAAGALALRGAGVAQALNAVAQTHGVAAANTNATRAGDEGHCPVRFVPQGELPPGE AYERYIFNTRHCPTRDGLHDFFNGLCWLQFPETKTRLNQLQAAEIASAGIRPVRGPVRDALTLFDENAAFLLAPQALWDA LIARDWQQLFIGLRPLWADTQLVLFGHALLEKLVYPRKPITAHVYRAQPAIDSIAELDAWVAADLSADKLAGKPFAPLPV LGVPGWWPENENFSFYDDSLVFRPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29377; Mature: 29245
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDAVSPLVAIDWSQPWFAPLRRAGEAAGALALRGAGVAQALNAVAQTHGVAAANTNATR CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECCCCCCC AGDEGHCPVRFVPQGELPPGEAYERYIFNTRHCPTRDGLHDFFNGLCWLQFPETKTRLNQ CCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCEEEEECCHHHHHHHH LQAAEIASAGIRPVRGPVRDALTLFDENAAFLLAPQALWDALIARDWQQLFIGLRPLWAD HHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC TQLVLFGHALLEKLVYPRKPITAHVYRAQPAIDSIAELDAWVAADLSADKLAGKPFAPLP CHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC VLGVPGWWPENENFSFYDDSLVFRPRR CCCCCCCCCCCCCCCEECCCEEECCCC >Mature Secondary Structure PDAVSPLVAIDWSQPWFAPLRRAGEAAGALALRGAGVAQALNAVAQTHGVAAANTNATR CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECCCCCCC AGDEGHCPVRFVPQGELPPGEAYERYIFNTRHCPTRDGLHDFFNGLCWLQFPETKTRLNQ CCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCEEEEECCHHHHHHHH LQAAEIASAGIRPVRGPVRDALTLFDENAAFLLAPQALWDALIARDWQQLFIGLRPLWAD HHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC TQLVLFGHALLEKLVYPRKPITAHVYRAQPAIDSIAELDAWVAADLSADKLAGKPFAPLP CHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC VLGVPGWWPENENFSFYDDSLVFRPRR CCCCCCCCCCCCCCCEECCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA