Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786825
Identifier: 91786825
GI number: 91786825
Start: 940344
End: 942173
Strand: Direct
Name: 91786825
Synonym: Bpro_0923
Alternate gene names: NA
Gene position: 940344-942173 (Clockwise)
Preceding gene: 91786823
Following gene: 91786827
Centisome position: 18.08
GC content: 65.19
Gene sequence:
>1830_bases ATGTTGTCTGGAAGTAAGCAATTGCGTCGCCTATTGTGTTCATCGCTCGTGTTTCTCCCGCGGCTGGCTTCCTGCCTGGC AGGCCTGCTGCTGGTTCACGGGCAGGTTTTTGCGCAGGAGGCTGCGAGCCTTCAAGCGGTGGAGCCGCGCCCCGTCCACG CGCAAATCGCCGTCGCAGGCACCTCAGGCTTCCAGAAAGAAGCGTCGATGCTGCTCGACACGTCGGGCGATCTCACGGTA GACCAGGTTCATGCGCGGTTTGAGGCGGGTGAGGGCCAGCCCGTCAGCGCGGGGCAGATCATGCCTGCCGGTGGTGGCCG CACGCTCTGGTACCAGCTCAAACTGAGCTCTGTAGCCATACCCGCGCGGCTCGTGCTGGCGGTGCCGTATCCCGGCATGG ACAACGTGGAGCTTTACCGCCTGGCACCGCAGGCGGGGGGCGAGGGCGAGTGGCAGCTGCAACGTTCGGGCGACCAGATC CCGGTCATGGCCTGGCCATTGCGGCACTTGTATCCGGCCTTCGAACTGCAGGTTCTGCCGGGTGAAAACCGGCCCACCTA CCTGCGCATTGCCCACAACCACCCCATCCTTGTTTACTGGACCTTGTCGGACGCGCGCAGTTTTCAGGAGCGCAGCGAGC ACTGGCATCTGCTGCTGGGCATCTATATCGGGCTGGTGCTCCTGATTGTCGTGATGAGCGCCTTTCATGCTGTGTCCTGG CGCGATTCGATCCATCTCTTTTACGCAGGGTATGTGCTCGTGGTCGCAGTTGGCCAGCTGGCCCTGACAGGCCTGGGCGG AGAGTATTTCTGGCCAGGTTCGGCATGGTGGAACGATCGTGCGCCGGTGGCGTTGACCTTGCTGGGTGCGGCTTTTCTGC ATCTGTTGCTGCGCCAGCTCGTGGTCGAGCGGGATGTGCCGTCCTGGCTGTCCCGTTGGCTGCTGACCATGTCGGCGCTC GGTGCGATGCTCGCGCTGGGCTTTGTGGTGGCTGAGAACAAGCCGTATTTTGTCTTCCCCTTGCCTTACTACCTGGTCAG CATGGCCGTTTACCTGGGCGTGGCGGGCTGGTATGCGCGGCGCAGGCCCCGAGTGGGTCTGTGGGTGCTGGCTGCCATGA TCTGCCTGGCGGGCGGGTCCATCTTCCCGTTGCTCCTCAGGCTCGGCCTCTTGCCCCTGAGCGTGGCCGCCCAGTATGGC GCGCAGATTGGCGCAGCCCTTGAAATCCTGCTGCTGCTGATTGGCCTGTATTTCCGCAGCAACGAGCGGCGCGACACCCA TGCGCGCGTCGGAGCACTCGGCCGCGTGGATCCACTGACCGGCGTTGCCAGTCATCGGGTCCTGCTGCGGCGCCTGGAGC AGCTGATTCTTCGCCAGGAGCGCCACCCGGGTGCGGGTGCGGTCCTGCGCATCCGGGTCGGCAATGCCATTGACATCCGC CAGGAGTACGGGATGGAAGCTGCGCAGGGCGCGGTGGTACATGCCGGCGCCTGCGTCACCGCAGTGGCCCAGGAAGGCGA TACCGTGGCACGGCATCGCGATGGCGATTTCGTGCTGATCCTGCAGGGCAATGTCACGCGCGAGCAACTGACCGCGCTCG GACAGCGCCTGATCGCCCGGGGGCTGACCGAGAGCCCCAGTCTGCCGCCCAGGACGGTGCTGCGGCTCAAGGTGGCGGTG GCGCAGGCGCCCTTCAAGACGAAAGACCCCGCGCAGCTGCTTCAGTCACTGGGGGCTGTGCTGGCCGAGCTTGCAGGGCA CGCCGGCACGGCACTGCGGTTTGTCAGCGCGCCGGATGCCCCGCACGCTGCGATGAAGCACAAACCCTAG
Upstream 100 bases:
>100_bases TGCACTGAATTAGTGTGAATCAGTGACTCGTAGTGACGCCTGTTGTTTCCGGTGGGGTACCCAGACTTCCTTCGTTTTTC AACAGGGCATCGCATGGACC
Downstream 100 bases:
>100_bases TGCAGTCTGTCGGGCTCAGCGAACGCGCAAACCCGGTGATGCGCCAGGCAGCGGCTCCAGCACATAAATGCCGGGCTGGG CTTTCTCGTCAGCGTGGCTG
Product: diguanylate cyclase
Products: NA
Alternate protein names: Sensor Histidine Kinase; Lost Adherence Sensor LadS; Two-Component System Sensor Kinase; Integral Membrane Sensor Hybrid Histidine Kinase; Periplasmic Sensor Hybrid Histidine Kinase
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MLSGSKQLRRLLCSSLVFLPRLASCLAGLLLVHGQVFAQEAASLQAVEPRPVHAQIAVAGTSGFQKEASMLLDTSGDLTV DQVHARFEAGEGQPVSAGQIMPAGGGRTLWYQLKLSSVAIPARLVLAVPYPGMDNVELYRLAPQAGGEGEWQLQRSGDQI PVMAWPLRHLYPAFELQVLPGENRPTYLRIAHNHPILVYWTLSDARSFQERSEHWHLLLGIYIGLVLLIVVMSAFHAVSW RDSIHLFYAGYVLVVAVGQLALTGLGGEYFWPGSAWWNDRAPVALTLLGAAFLHLLLRQLVVERDVPSWLSRWLLTMSAL GAMLALGFVVAENKPYFVFPLPYYLVSMAVYLGVAGWYARRRPRVGLWVLAAMICLAGGSIFPLLLRLGLLPLSVAAQYG AQIGAALEILLLLIGLYFRSNERRDTHARVGALGRVDPLTGVASHRVLLRRLEQLILRQERHPGAGAVLRIRVGNAIDIR QEYGMEAAQGAVVHAGACVTAVAQEGDTVARHRDGDFVLILQGNVTREQLTALGQRLIARGLTESPSLPPRTVLRLKVAV AQAPFKTKDPAQLLQSLGAVLAELAGHAGTALRFVSAPDAPHAAMKHKP
Sequences:
>Translated_609_residues MLSGSKQLRRLLCSSLVFLPRLASCLAGLLLVHGQVFAQEAASLQAVEPRPVHAQIAVAGTSGFQKEASMLLDTSGDLTV DQVHARFEAGEGQPVSAGQIMPAGGGRTLWYQLKLSSVAIPARLVLAVPYPGMDNVELYRLAPQAGGEGEWQLQRSGDQI PVMAWPLRHLYPAFELQVLPGENRPTYLRIAHNHPILVYWTLSDARSFQERSEHWHLLLGIYIGLVLLIVVMSAFHAVSW RDSIHLFYAGYVLVVAVGQLALTGLGGEYFWPGSAWWNDRAPVALTLLGAAFLHLLLRQLVVERDVPSWLSRWLLTMSAL GAMLALGFVVAENKPYFVFPLPYYLVSMAVYLGVAGWYARRRPRVGLWVLAAMICLAGGSIFPLLLRLGLLPLSVAAQYG AQIGAALEILLLLIGLYFRSNERRDTHARVGALGRVDPLTGVASHRVLLRRLEQLILRQERHPGAGAVLRIRVGNAIDIR QEYGMEAAQGAVVHAGACVTAVAQEGDTVARHRDGDFVLILQGNVTREQLTALGQRLIARGLTESPSLPPRTVLRLKVAV AQAPFKTKDPAQLLQSLGAVLAELAGHAGTALRFVSAPDAPHAAMKHKP >Mature_609_residues MLSGSKQLRRLLCSSLVFLPRLASCLAGLLLVHGQVFAQEAASLQAVEPRPVHAQIAVAGTSGFQKEASMLLDTSGDLTV DQVHARFEAGEGQPVSAGQIMPAGGGRTLWYQLKLSSVAIPARLVLAVPYPGMDNVELYRLAPQAGGEGEWQLQRSGDQI PVMAWPLRHLYPAFELQVLPGENRPTYLRIAHNHPILVYWTLSDARSFQERSEHWHLLLGIYIGLVLLIVVMSAFHAVSW RDSIHLFYAGYVLVVAVGQLALTGLGGEYFWPGSAWWNDRAPVALTLLGAAFLHLLLRQLVVERDVPSWLSRWLLTMSAL GAMLALGFVVAENKPYFVFPLPYYLVSMAVYLGVAGWYARRRPRVGLWVLAAMICLAGGSIFPLLLRLGLLPLSVAAQYG AQIGAALEILLLLIGLYFRSNERRDTHARVGALGRVDPLTGVASHRVLLRRLEQLILRQERHPGAGAVLRIRVGNAIDIR QEYGMEAAQGAVVHAGACVTAVAQEGDTVARHRDGDFVLILQGNVTREQLTALGQRLIARGLTESPSLPPRTVLRLKVAV AQAPFKTKDPAQLLQSLGAVLAELAGHAGTALRFVSAPDAPHAAMKHKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66295; Mature: 66295
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGSKQLRRLLCSSLVFLPRLASCLAGLLLVHGQVFAQEAASLQAVEPRPVHAQIAVAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC TSGFQKEASMLLDTSGDLTVDQVHARFEAGEGQPVSAGQIMPAGGGRTLWYQLKLSSVAI CCCCHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCC PARLVLAVPYPGMDNVELYRLAPQAGGEGEWQLQRSGDQIPVMAWPLRHLYPAFELQVLP CEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCEEECCHHHCCCCEEEEEEC GENRPTYLRIAHNHPILVYWTLSDARSFQERSEHWHLLLGIYIGLVLLIVVMSAFHAVSW CCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RDSIHLFYAGYVLVVAVGQLALTGLGGEYFWPGSAWWNDRAPVALTLLGAAFLHLLLRQL CCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VVERDVPSWLSRWLLTMSALGAMLALGFVVAENKPYFVFPLPYYLVSMAVYLGVAGWYAR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHH RRPRVGLWVLAAMICLAGGSIFPLLLRLGLLPLSVAAQYGAQIGAALEILLLLIGLYFRS CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NERRDTHARVGALGRVDPLTGVASHRVLLRRLEQLILRQERHPGAGAVLRIRVGNAIDIR CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEHH QEYGMEAAQGAVVHAGACVTAVAQEGDTVARHRDGDFVLILQGNVTREQLTALGQRLIAR HHHCCHHHCCCEEECCHHHHHHHHCCCHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHC GLTESPSLPPRTVLRLKVAVAQAPFKTKDPAQLLQSLGAVLAELAGHAGTALRFVSAPDA CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC PHAAMKHKP CCCCCCCCC >Mature Secondary Structure MLSGSKQLRRLLCSSLVFLPRLASCLAGLLLVHGQVFAQEAASLQAVEPRPVHAQIAVAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC TSGFQKEASMLLDTSGDLTVDQVHARFEAGEGQPVSAGQIMPAGGGRTLWYQLKLSSVAI CCCCHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCC PARLVLAVPYPGMDNVELYRLAPQAGGEGEWQLQRSGDQIPVMAWPLRHLYPAFELQVLP CEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCEEECCHHHCCCCEEEEEEC GENRPTYLRIAHNHPILVYWTLSDARSFQERSEHWHLLLGIYIGLVLLIVVMSAFHAVSW CCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RDSIHLFYAGYVLVVAVGQLALTGLGGEYFWPGSAWWNDRAPVALTLLGAAFLHLLLRQL CCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VVERDVPSWLSRWLLTMSALGAMLALGFVVAENKPYFVFPLPYYLVSMAVYLGVAGWYAR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHH RRPRVGLWVLAAMICLAGGSIFPLLLRLGLLPLSVAAQYGAQIGAALEILLLLIGLYFRS CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NERRDTHARVGALGRVDPLTGVASHRVLLRRLEQLILRQERHPGAGAVLRIRVGNAIDIR CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEHH QEYGMEAAQGAVVHAGACVTAVAQEGDTVARHRDGDFVLILQGNVTREQLTALGQRLIAR HHHCCHHHCCCEEECCHHHHHHHHCCCHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHC GLTESPSLPPRTVLRLKVAVAQAPFKTKDPAQLLQSLGAVLAELAGHAGTALRFVSAPDA CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC PHAAMKHKP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA