Click here to switch to the map view.

The map label for this gene is hyfE [C]

Identifier: 91786820

GI number: 91786820

Start: 935165

End: 935824

Strand: Direct

Name: hyfE [C]

Synonym: Bpro_0918

Alternate gene names: 91786820

Gene position: 935165-935824 (Clockwise)

Preceding gene: 91786819

Following gene: 91786821

Centisome position: 17.98

GC content: 61.97

Gene sequence:

>660_bases
ATGAGCGCCTTGTTGACCCAGTTCGTCAATCTGCTCGGCGCGGTGCTGCTGATGCTCGCGTTCGCGATGATCGCGCAGCG
GCGCATCCTGTCGCTGATTCACCTGTTCACGATGCAGGGCGCGACGCTGGTGCTGGCGACCGGCGTGGTTGGCTACGTGA
CGAATCAGCCGCACCTGTACATCTCGGCCGGCGTGACTTTCGTGCTCAAGGTCCTGTTGATCCCGTACCTGCTGCACCGG
GTCATCGACCGCCTCAATATTCGCTGGGACGTCGAGACGCTGATCAATATCCCGACGACCATGCTGATCGGCATCGTGGT
CGTGATCTTCGCATTCGACCTCGCGATGCCGATCGCGCGGCTGTCGTCGGCGCTGGCCAGTGGCACGCTGGGCATCGCAC
TGGCCTGCGTGCTGCTGTCCTTCCTGATGATGATCACGCGCGCGAAGGCGGTGCCGCAGGTGATCGGCTTCCTGGCGATG
GAAAACGGCCTGTTCTTTGCCGCCACCTCGGCCACCTACGGCATGCCCATGGTGGTGGAGCTCGGCATCGCGCTGGATGT
GCTGATCGGCGTGCTGATCCTGGGCGTGTTCATGTTCCAGATCCGCGAGCAGTTCGACAGCCTGGACATCAGCCATCTCG
AAAAACTCAAGGATGACTGA

Upstream 100 bases:

>100_bases
CTGCTGCTCGGGCAATGATGCAATGCCGCCGCGCTCATTTCATTCGCCGCCCCCCCAGGGGGAGGCTCGGCGCCCTTGAT
GCGGCCGGGCGGGTATTGAG

Downstream 100 bases:

>100_bases
GTTGCTTGCCCTGGCCTTCCTCCTCGCAACCCCGCTCGCCGGCGGGCTGGTGCTGGCGCTGGTCGGCCACCGCGACAACG
CGCGCGATGTCAACGTCGCC

Product: hydrogenase 4 membrane component

Products: H2; oxidized ferredoxin [C]

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSALLTQFVNLLGAVLLMLAFAMIAQRRILSLIHLFTMQGATLVLATGVVGYVTNQPHLYISAGVTFVLKVLLIPYLLHR
VIDRLNIRWDVETLINIPTTMLIGIVVVIFAFDLAMPIARLSSALASGTLGIALACVLLSFLMMITRAKAVPQVIGFLAM
ENGLFFAATSATYGMPMVVELGIALDVLIGVLILGVFMFQIREQFDSLDISHLEKLKDD

Sequences:

>Translated_219_residues
MSALLTQFVNLLGAVLLMLAFAMIAQRRILSLIHLFTMQGATLVLATGVVGYVTNQPHLYISAGVTFVLKVLLIPYLLHR
VIDRLNIRWDVETLINIPTTMLIGIVVVIFAFDLAMPIARLSSALASGTLGIALACVLLSFLMMITRAKAVPQVIGFLAM
ENGLFFAATSATYGMPMVVELGIALDVLIGVLILGVFMFQIREQFDSLDISHLEKLKDD
>Mature_218_residues
SALLTQFVNLLGAVLLMLAFAMIAQRRILSLIHLFTMQGATLVLATGVVGYVTNQPHLYISAGVTFVLKVLLIPYLLHRV
IDRLNIRWDVETLINIPTTMLIGIVVVIFAFDLAMPIARLSSALASGTLGIALACVLLSFLMMITRAKAVPQVIGFLAME
NGLFFAATSATYGMPMVVELGIALDVLIGVLILGVFMFQIREQFDSLDISHLEKLKDD

Specific function: Unknown

COG id: COG4237

COG function: function code C; Hydrogenase 4 membrane component (E)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 23893; Mature: 23762

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALLTQFVNLLGAVLLMLAFAMIAQRRILSLIHLFTMQGATLVLATGVVGYVTNQPHLY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEE
ISAGVTFVLKVLLIPYLLHRVIDRLNIRWDVETLINIPTTMLIGIVVVIFAFDLAMPIAR
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LSSALASGTLGIALACVLLSFLMMITRAKAVPQVIGFLAMENGLFFAATSATYGMPMVVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
LGIALDVLIGVLILGVFMFQIREQFDSLDISHLEKLKDD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
SALLTQFVNLLGAVLLMLAFAMIAQRRILSLIHLFTMQGATLVLATGVVGYVTNQPHLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEE
ISAGVTFVLKVLLIPYLLHRVIDRLNIRWDVETLINIPTTMLIGIVVVIFAFDLAMPIAR
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LSSALASGTLGIALACVLLSFLMMITRAKAVPQVIGFLAMENGLFFAATSATYGMPMVVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
LGIALDVLIGVLILGVFMFQIREQFDSLDISHLEKLKDD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton; reduced ferredoxin [C]

Specific reaction: Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]