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The map label for this gene is hycD [H]

Identifier: 91786819

GI number: 91786819

Start: 934135

End: 935082

Strand: Direct

Name: hycD [H]

Synonym: Bpro_0917

Alternate gene names: 91786819

Gene position: 934135-935082 (Clockwise)

Preceding gene: 91786818

Following gene: 91786820

Centisome position: 17.96

GC content: 64.03

Gene sequence:

>948_bases
ATGACCTTCTCCGGCTTTCTGTCGCAGTTGCTCGAGATCATCCTCGCGATCTCGATGGCGCCGTTGCTGACTGGCTGGGT
CAACCAGTGGCGTGCCTGGCTGCAGAACAAATCCGCGCCCAGCCTCTGGCAACCCTACCGGATGCTGCACAAGCTGTTCA
ACAAGGAATCGATGGTGGCCGACAGCGCATCGCGCCTGTTTCGCATCGCGCCTTACGTGGTGTTTGGCTGTATGGTGCTG
GCATGCTCGATCATCCCCACCGTCTCCACAGACCTGCCACTGGCGACGGCGGCCGATGCGATCGCGCTGGTCGGCCTGTT
TGCGCTGGCGCGCGTGTTCATCTCGCTGGCCGCCATGGACATCGGCACTGCCTTCGGCACCATGGGCGCGCGACGCGAGA
TGCTGATCGGCTTTCTGGCCGAGCCGGCGCTGTTGATGGTGCTGTTCTCGGCATCGCTCATTTCAAAATCGACCTCGCTC
ACCACCATCGTCGAGACGCTCGCCCATCGCGAACTGGCCATCTACCCTGGCCTGGCCTTTGCCGGCGTTGCATTCACGAT
GGTGTCGCTGGCGGAGAACGCCCGCGTACCGGTCGACAACCCCGCCACGCACCTGGAACTGACGATGATCCACGAGGCGC
TCATCCTGGAATACTCGGGCCGCCACCTGGCGTTGATCGAGTGGGCGGCCAGCCTGAAGCTGTTCGCCTACTCGTGCATC
GGCCTGGCGCTGTTTTTCCCCTGGGGCGTGGCCGAGGCCCAGGCCCCGCTGGCCATGCTGCTGGCACTGCCCGTACTGGT
GTTCAAGCTCGCCGTCGGTGGCTTCCTGCTTGCCGCGCTGGAGGCGTTCTCCGCCAAGATGCGCATCTTCCGCGTTCCCG
AGTTCCTGGCCACCGCCTTCCTGCTGGCGGTGATCGGAATGCTGGTGCAACTGCTGCTCGGGCAATGA

Upstream 100 bases:

>100_bases
GGCGGTGATGCGATGAGGCGGTCATGAGCACGGCGCCGGACCGGTTCCATGCAGTGCTGCGCCCCCCGGGGGCCGGGCGC
GCGGCGGCCTGGGGGCAGAC

Downstream 100 bases:

>100_bases
TGCAATGCCGCCGCGCTCATTTCATTCGCCGCCCCCCCAGGGGGAGGCTCGGCGCCCTTGATGCGGCCGGGCGGGTATTG
AGATGAGCGCCTTGTTGACC

Product: respiratory-chain NADH dehydrogenase subunit 1

Products: NA

Alternate protein names: FHL subunit 4; Hydrogenase 3 component D [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTFSGFLSQLLEIILAISMAPLLTGWVNQWRAWLQNKSAPSLWQPYRMLHKLFNKESMVADSASRLFRIAPYVVFGCMVL
ACSIIPTVSTDLPLATAADAIALVGLFALARVFISLAAMDIGTAFGTMGARREMLIGFLAEPALLMVLFSASLISKSTSL
TTIVETLAHRELAIYPGLAFAGVAFTMVSLAENARVPVDNPATHLELTMIHEALILEYSGRHLALIEWAASLKLFAYSCI
GLALFFPWGVAEAQAPLAMLLALPVLVFKLAVGGFLLAALEAFSAKMRIFRVPEFLATAFLLAVIGMLVQLLLGQ

Sequences:

>Translated_315_residues
MTFSGFLSQLLEIILAISMAPLLTGWVNQWRAWLQNKSAPSLWQPYRMLHKLFNKESMVADSASRLFRIAPYVVFGCMVL
ACSIIPTVSTDLPLATAADAIALVGLFALARVFISLAAMDIGTAFGTMGARREMLIGFLAEPALLMVLFSASLISKSTSL
TTIVETLAHRELAIYPGLAFAGVAFTMVSLAENARVPVDNPATHLELTMIHEALILEYSGRHLALIEWAASLKLFAYSCI
GLALFFPWGVAEAQAPLAMLLALPVLVFKLAVGGFLLAALEAFSAKMRIFRVPEFLATAFLLAVIGMLVQLLLGQ
>Mature_314_residues
TFSGFLSQLLEIILAISMAPLLTGWVNQWRAWLQNKSAPSLWQPYRMLHKLFNKESMVADSASRLFRIAPYVVFGCMVLA
CSIIPTVSTDLPLATAADAIALVGLFALARVFISLAAMDIGTAFGTMGARREMLIGFLAEPALLMVLFSASLISKSTSLT
TIVETLAHRELAIYPGLAFAGVAFTMVSLAENARVPVDNPATHLELTMIHEALILEYSGRHLALIEWAASLKLFAYSCIG
LALFFPWGVAEAQAPLAMLLALPVLVFKLAVGGFLLAALEAFSAKMRIFRVPEFLATAFLLAVIGMLVQLLLGQ

Specific function: Hydrogen metabolism; FHL pathway. [C]

COG id: COG0650

COG function: function code C; Formate hydrogenlyase subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789077, Length=294, Percent_Identity=32.6530612244898, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI87082115, Length=246, Percent_Identity=33.739837398374, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001694
- InterPro:   IPR018086 [H]

Pfam domain/function: PF00146 NADHdh [H]

EC number: NA

Molecular weight: Translated: 34109; Mature: 33978

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSGFLSQLLEIILAISMAPLLTGWVNQWRAWLQNKSAPSLWQPYRMLHKLFNKESMVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHH
DSASRLFRIAPYVVFGCMVLACSIIPTVSTDLPLATAADAIALVGLFALARVFISLAAMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGTAFGTMGARREMLIGFLAEPALLMVLFSASLISKSTSLTTIVETLAHRELAIYPGLAF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHH
AGVAFTMVSLAENARVPVDNPATHLELTMIHEALILEYSGRHLALIEWAASLKLFAYSCI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
GLALFFPWGVAEAQAPLAMLLALPVLVFKLAVGGFLLAALEAFSAKMRIFRVPEFLATAF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVIGMLVQLLLGQ
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFSGFLSQLLEIILAISMAPLLTGWVNQWRAWLQNKSAPSLWQPYRMLHKLFNKESMVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHH
DSASRLFRIAPYVVFGCMVLACSIIPTVSTDLPLATAADAIALVGLFALARVFISLAAMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGTAFGTMGARREMLIGFLAEPALLMVLFSASLISKSTSLTTIVETLAHRELAIYPGLAF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHH
AGVAFTMVSLAENARVPVDNPATHLELTMIHEALILEYSGRHLALIEWAASLKLFAYSCI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
GLALFFPWGVAEAQAPLAMLLALPVLVFKLAVGGFLLAALEAFSAKMRIFRVPEFLATAF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVIGMLVQLLLGQ
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2187144; 9278503 [H]