Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is hisA [H]
Identifier: 91786710
GI number: 91786710
Start: 833944
End: 834684
Strand: Direct
Name: hisA [H]
Synonym: Bpro_0808
Alternate gene names: 91786710
Gene position: 833944-834684 (Clockwise)
Preceding gene: 91786709
Following gene: 91786711
Centisome position: 16.04
GC content: 60.05
Gene sequence:
>741_bases ATGCTACTTATTCCCGCGATTGACCTGAAAGATGGTCACTGCGTTCGCCTCAAACAGGGCGACATGGATCAATCCACCAT CTTCAGCGAAGACCCGGCGGCCATGGCGCGCAGCTGGGTCGACAAGGGCGCACGCCGCCTGCATCTGGTGGACCTGAACG GCGCCTTTGCCGGCAAGCCGAAAAACGAGGCCGCCATCAAGAAAATCCTGGCCGAAGTCGGCAGCGAGATCGATGTGCAA CTGGGCGGCGGTATTCGCGATCTCGACACCATAGAGCGTTATCTGGACGCCGGCCTGCGCTACGTGATCATCGGAACGGC CGCGGTCAAGAACCCCGGCTTCCTGCAGGATGCCTGCACTGCCTTTGGCGGCCACATCATCGTCGGCCTGGATGCCAAGG ATGGCAAGGTTGCTACCGATGGCTGGAGCAAGCTCACCGGCCACGAAGTGATCGACCTGGGCAAGAAATTCCAGGACTAC GGCGTCGAGTCCATCATCTATACCGACATCGGCCGCGACGGCATGCTCAGCGGCATCAACATTGAAGCAACTGTCAGGCT CGCGCAGGCGCTGACCATTCCGGTGATCGCCTCCGGCGGCCTGTCAAACATGGCCGACATTGAAGCGCTGTGCGACGTTG AAGAAGAAGGCGTTGAAGGCGTGATCTGCGGCCGCTCCATTTACAGCGGCGATCTGGATTTTGCCGCAGCGCAGGCAAGA GCTGATGAGCTGAACGGATGA
Upstream 100 bases:
>100_bases TCCTGCACTGGAAGCCCTGAAGGCCGCCGGGCAGCAGGGCGACTCATCATAATTTCCAGCTCTTTGTTAACCCCGCCACC TGTTTTCCTCTTACCGCAAC
Downstream 100 bases:
>100_bases GCGCAGCTGCAACGAGTGGCAGGTTGTGCAGAGGGGCTGTAGTGGACGCGCATGACGGTTTAGTATTCCAGCCAGGGCCG CGGAACCGGCTTCGCCGGGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MLLIPAIDLKDGHCVRLKQGDMDQSTIFSEDPAAMARSWVDKGARRLHLVDLNGAFAGKPKNEAAIKKILAEVGSEIDVQ LGGGIRDLDTIERYLDAGLRYVIIGTAAVKNPGFLQDACTAFGGHIIVGLDAKDGKVATDGWSKLTGHEVIDLGKKFQDY GVESIIYTDIGRDGMLSGINIEATVRLAQALTIPVIASGGLSNMADIEALCDVEEEGVEGVICGRSIYSGDLDFAAAQAR ADELNG
Sequences:
>Translated_246_residues MLLIPAIDLKDGHCVRLKQGDMDQSTIFSEDPAAMARSWVDKGARRLHLVDLNGAFAGKPKNEAAIKKILAEVGSEIDVQ LGGGIRDLDTIERYLDAGLRYVIIGTAAVKNPGFLQDACTAFGGHIIVGLDAKDGKVATDGWSKLTGHEVIDLGKKFQDY GVESIIYTDIGRDGMLSGINIEATVRLAQALTIPVIASGGLSNMADIEALCDVEEEGVEGVICGRSIYSGDLDFAAAQAR ADELNG >Mature_246_residues MLLIPAIDLKDGHCVRLKQGDMDQSTIFSEDPAAMARSWVDKGARRLHLVDLNGAFAGKPKNEAAIKKILAEVGSEIDVQ LGGGIRDLDTIERYLDAGLRYVIIGTAAVKNPGFLQDACTAFGGHIIVGLDAKDGKVATDGWSKLTGHEVIDLGKKFQDY GVESIIYTDIGRDGMLSGINIEATVRLAQALTIPVIASGGLSNMADIEALCDVEEEGVEGVICGRSIYSGDLDFAAAQAR ADELNG
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=248, Percent_Identity=33.0645161290323, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1788336, Length=227, Percent_Identity=25.1101321585903, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26089; Mature: 26089
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPAIDLKDGHCVRLKQGDMDQSTIFSEDPAAMARSWVDKGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNEAAIKKILAEVGSEIDVQLGGGIRDLDTIERYLDAGLRYVIIGTAAVKNPGFLQDACT CCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVIDLGKKFQDYGVESIIYTDIGRDGMLSGIN HCCCEEEEEEECCCCEEECCCCHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC IEATVRLAQALTIPVIASGGLSNMADIEALCDVEEEGVEGVICGRSIYSGDLDFAAAQAR HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHCCHHCCCCEEEECCEEECCCCCHHHHHHH ADELNG HHCCCC >Mature Secondary Structure MLLIPAIDLKDGHCVRLKQGDMDQSTIFSEDPAAMARSWVDKGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNEAAIKKILAEVGSEIDVQLGGGIRDLDTIERYLDAGLRYVIIGTAAVKNPGFLQDACT CCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVIDLGKKFQDYGVESIIYTDIGRDGMLSGIN HCCCEEEEEEECCCCEEECCCCHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC IEATVRLAQALTIPVIASGGLSNMADIEALCDVEEEGVEGVICGRSIYSGDLDFAAAQAR HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHCCHHCCCCEEEECCEEECCCCCHHHHHHH ADELNG HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA