Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is hisH [H]
Identifier: 91786709
GI number: 91786709
Start: 833192
End: 833863
Strand: Direct
Name: hisH [H]
Synonym: Bpro_0807
Alternate gene names: 91786709
Gene position: 833192-833863 (Clockwise)
Preceding gene: 91786708
Following gene: 91786710
Centisome position: 16.02
GC content: 63.54
Gene sequence:
>672_bases ATGTCTAATGTGAAAAGAGTGGCGGTCGTCGACTACGGCTCGGGCAACCTGCGTTCGGTGTCACAAGCTGTTCAGCATGT GTCTCAGGGCAGCGGCTATGAGGTGTTGGTCACCTCGCGCGCGCAGGACGTGCTGGACGCCGAGCGTGTGGTGCTGCCCG GCCAGGGGGCCATGCCTGACTGCATGCGGGCGCTGTCTGAATCCGGCCTGAAGGATGCGGTATTGCATGCCGCCGCGAAC AAACCCCTGTTCGGCGTGTGTGTGGGCATGCAGATGCTGCTGGACCGCAGTCACGAGGGGGTCGCCGGCATCGCAACGCC CGGCCTGGGCCTGATTCCCGGCGAGGTCGTCAAGTTCGACCTGGCCGGGCAGATCCAGCCCGATGGCAGCCGCTACAAGG TGCCGCAAATGGGCTGGAACCAGGTGTGGCGGCCTGCCTCGATCCAGCACCCGATCTGGGCTGGCGTGCCGGACGGTGCC TATTTTTACTTCGTGCACAGCTTTTATGCCCGTCCGTCGGATGCGCGCCACATCGCCGGAGAGGCGGACTATGGCGGGCG CTTTACGGCGGCAATTGCACGCGATAATATTTTTGCCACCCAGTTCCACCCCGAGAAAAGCGCCGACCACGGACTGGCCC TGTACCGCAATTTCCTGCACTGGAAGCCCTGA
Upstream 100 bases:
>100_bases AGGTGCCGGTGCGCCATGGATGGACCGTTCCCCGTTTTGGGTTTTCTGCCCCGCTAGAATGGACGTCAATAGCTCCTGAG TCCGTAGCAAATATCGATGA
Downstream 100 bases:
>100_bases AGGCCGCCGGGCAGCAGGGCGACTCATCATAATTTCCAGCTCTTTGTTAACCCCGCCACCTGTTTTCCTCTTACCGCAAC ATGCTACTTATTCCCGCGAT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSNVKRVAVVDYGSGNLRSVSQAVQHVSQGSGYEVLVTSRAQDVLDAERVVLPGQGAMPDCMRALSESGLKDAVLHAAAN KPLFGVCVGMQMLLDRSHEGVAGIATPGLGLIPGEVVKFDLAGQIQPDGSRYKVPQMGWNQVWRPASIQHPIWAGVPDGA YFYFVHSFYARPSDARHIAGEADYGGRFTAAIARDNIFATQFHPEKSADHGLALYRNFLHWKP
Sequences:
>Translated_223_residues MSNVKRVAVVDYGSGNLRSVSQAVQHVSQGSGYEVLVTSRAQDVLDAERVVLPGQGAMPDCMRALSESGLKDAVLHAAAN KPLFGVCVGMQMLLDRSHEGVAGIATPGLGLIPGEVVKFDLAGQIQPDGSRYKVPQMGWNQVWRPASIQHPIWAGVPDGA YFYFVHSFYARPSDARHIAGEADYGGRFTAAIARDNIFATQFHPEKSADHGLALYRNFLHWKP >Mature_222_residues SNVKRVAVVDYGSGNLRSVSQAVQHVSQGSGYEVLVTSRAQDVLDAERVVLPGQGAMPDCMRALSESGLKDAVLHAAANK PLFGVCVGMQMLLDRSHEGVAGIATPGLGLIPGEVVKFDLAGQIQPDGSRYKVPQMGWNQVWRPASIQHPIWAGVPDGAY FYFVHSFYARPSDARHIAGEADYGGRFTAAIARDNIFATQFHPEKSADHGLALYRNFLHWKP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=215, Percent_Identity=38.6046511627907, Blast_Score=125, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6319725, Length=225, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 24201; Mature: 24070
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVKRVAVVDYGSGNLRSVSQAVQHVSQGSGYEVLVTSRAQDVLDAERVVLPGQGAMPD CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECCCCCCHH CMRALSESGLKDAVLHAAANKPLFGVCVGMQMLLDRSHEGVAGIATPGLGLIPGEVVKFD HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEE LAGQIQPDGSRYKVPQMGWNQVWRPASIQHPIWAGVPDGAYFYFVHSFYARPSDARHIAG ECCEECCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCHHHEEHHHHHCCCCCCCCCCC EADYGGRFTAAIARDNIFATQFHPEKSADHGLALYRNFLHWKP CCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure SNVKRVAVVDYGSGNLRSVSQAVQHVSQGSGYEVLVTSRAQDVLDAERVVLPGQGAMPD CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECCCCCCHH CMRALSESGLKDAVLHAAANKPLFGVCVGMQMLLDRSHEGVAGIATPGLGLIPGEVVKFD HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEE LAGQIQPDGSRYKVPQMGWNQVWRPASIQHPIWAGVPDGAYFYFVHSFYARPSDARHIAG ECCEECCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCHHHEEHHHHHCCCCCCCCCCC EADYGGRFTAAIARDNIFATQFHPEKSADHGLALYRNFLHWKP CCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]