Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is mlaD [H]
Identifier: 91786697
GI number: 91786697
Start: 823012
End: 823518
Strand: Direct
Name: mlaD [H]
Synonym: Bpro_0795
Alternate gene names: 91786697
Gene position: 823012-823518 (Clockwise)
Preceding gene: 91786696
Following gene: 91786698
Centisome position: 15.83
GC content: 54.64
Gene sequence:
>507_bases ATGCAACGTTCAAAAAACGACGTGTGGGTTGGACTGTTTGTCCTGATCGGTGGCGCCGCCATGCTGTTTCTGGCGCTCAA ATCGGCCAACCTGCTGACCCTGAGTTTTGACACCTCATACCGCGTTACGGCAAAGTTCGACAATATTGGTGGTCTCAAAC CACGCGCGGCCGTGAAAAGTGCGGGCGTTGTTGTCGGCCGGGTTGAAAATATCACTTTTGACGACAAGTCCTACCAGGCC AGTGTTCATCTGGCCATGGAAAGCCGCTATGCCTTTCCCAAGGACAGTTCGCTGAAAATACTGACCAGCGGTTTGCTGGG CGAGCAATACATCGGCGTGGAGGCCGGTGGGGATGAGAAAAACCTGGCGGCGGGGGATGTGATCAAGCAGACCCAGTCAG CCGTGGTGCTTGAAAGTCTGATCAGCCAGTTTTTGTATAGCAAAGCGGCGGACAGCAGTTCTGGATCAGGGGCTGCGCCG TCACCAGGGACGCCAGAAAAAAAATGA
Upstream 100 bases:
>100_bases GGATGTTCAGCCTTTAAGGCGGGACGCGCACCTTATGAATCCAACCATGCGAAAATTCATCCCCTTTGCCGGCGCAGGTT TGGGTCATTGAAGGAAAAAA
Downstream 100 bases:
>100_bases CGACGCGAACGATATCAACGACACAAAACACGATGAAGCGGTCCCTGTGGTGGGCGGCTGCAGCCTTGGCGCTGGCGCTG CTGCAGGGTTGCGCAACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKSAGVVVGRVENITFDDKSYQA SVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEKNLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAP SPGTPEKK
Sequences:
>Translated_168_residues MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKSAGVVVGRVENITFDDKSYQA SVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEKNLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAP SPGTPEKK >Mature_168_residues MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKSAGVVVGRVENITFDDKSYQA SVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEKNLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAP SPGTPEKK
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaD family [H]
Homologues:
Organism=Escherichia coli, GI1789584, Length=174, Percent_Identity=48.2758620689655, Blast_Score=149, Evalue=7e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 17722; Mature: 17722
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKS CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHH AGVVVGRVENITFDDKSYQASVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEK CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEECCCCCC NLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAPSPGTPEKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKS CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHH AGVVVGRVENITFDDKSYQASVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEK CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEECCCCCC NLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAPSPGTPEKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]