Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is mlaE [H]
Identifier: 91786696
GI number: 91786696
Start: 822134
End: 822928
Strand: Direct
Name: mlaE [H]
Synonym: Bpro_0794
Alternate gene names: 91786696
Gene position: 822134-822928 (Clockwise)
Preceding gene: 91786695
Following gene: 91786697
Centisome position: 15.81
GC content: 61.76
Gene sequence:
>795_bases ATGAGCCCTTACAGCCCCGTCCGCATGCTTTCCAATCTGGGTTTCGGCACGCGCAGCCAGCTGGCCGAGCTTGGCCATGC CGCGCGCCTGATGTCGCGCCTGCTGGCGCTGACGGGTCCGGCGCTGGCCCGTTTTGGCCTGGTGCGTGACCAGATTTTCT TTCTCGGCAATTATTCGCTGGCCATCATCACGGTATCCGGTCTTTTTGTGGGTTTTGTGCTCGGCCTGCAGGGCTACTAC ACGCTGCAGCGTTATGGCTCCTCGGAGGCCCTGGGCTTGCTGGTGGCGCTTAGCCTGGTGCGAGAACTGGGCCCTGTGGT CACGGCCTTGCTGTTTGCCGGCCGTGCCGGTACCTCGCTGACTGCAGAAATCGGCCTGATGAAAGCTGGTGAACAGCTAT CGGCCATGGAAATGATGGCCGTTGATCCGGTGCGTCGCATCCTCGCGCCCCGGTTCTGGGGTGGGGTGATCGCCATGCCG CTGCTGGCTGCGGTATTCAGTGCTGTCGGCATCATCGGGGGCTGGGTGGTCGGCGTGGTGATGATCGGTGTCGATGCGGG TTCTTTCTGGAGCCAGATGCAGGCCGGCGTGGATGTCTGGCGCGACGTTGGCAACGGTGTGATCAAAAGTTTTGTATTTG GTGTGACTGTCACTTTTGTGGCGCTGCACCAGGGGTTTGAAGCGCAACCTACGCCGGAAGGCGTGTCGCGCGCCACCACC CGCACCGTGGTGGTGGCGTCGCTGGCTGTGCTTGGACTGGACTTCTTGTTGACCGCCTGGATGTTCAGCCTTTAA
Upstream 100 bases:
>100_bases TCAACGCACAGAGCGAAGGTCCCGTGAAATTCCATTACCCCGGCCCGGACGTCGCCACCGATTTCGGACGGCAGGCTACA GCACGCCGGAGGGCTCGCTC
Downstream 100 bases:
>100_bases GGCGGGACGCGCACCTTATGAATCCAACCATGCGAAAATTCATCCCCTTTGCCGGCGCAGGTTTGGGTCATTGAAGGAAA AAAATGCAACGTTCAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSPYSPVRMLSNLGFGTRSQLAELGHAARLMSRLLALTGPALARFGLVRDQIFFLGNYSLAIITVSGLFVGFVLGLQGYY TLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMP LLAAVFSAVGIIGGWVVGVVMIGVDAGSFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQGFEAQPTPEGVSRATT RTVVVASLAVLGLDFLLTAWMFSL
Sequences:
>Translated_264_residues MSPYSPVRMLSNLGFGTRSQLAELGHAARLMSRLLALTGPALARFGLVRDQIFFLGNYSLAIITVSGLFVGFVLGLQGYY TLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMP LLAAVFSAVGIIGGWVVGVVMIGVDAGSFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQGFEAQPTPEGVSRATT RTVVVASLAVLGLDFLLTAWMFSL >Mature_263_residues SPYSPVRMLSNLGFGTRSQLAELGHAARLMSRLLALTGPALARFGLVRDQIFFLGNYSLAIITVSGLFVGFVLGLQGYYT LQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPL LAAVFSAVGIIGGWVVGVVMIGVDAGSFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQGFEAQPTPEGVSRATTR TVVVASLAVLGLDFLLTAWMFSL
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=217, Percent_Identity=64.5161290322581, Blast_Score=264, Evalue=4e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27977; Mature: 27846
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPYSPVRMLSNLGFGTRSQLAELGHAARLMSRLLALTGPALARFGLVRDQIFFLGNYSL CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCE AIITVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSL EEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH TAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAAVFSAVGIIGGWVVGVV HHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGVDAGSFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQGFEAQPTPEGVSRATT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH RTVVVASLAVLGLDFLLTAWMFSL HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPYSPVRMLSNLGFGTRSQLAELGHAARLMSRLLALTGPALARFGLVRDQIFFLGNYSL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCE AIITVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSL EEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH TAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAAVFSAVGIIGGWVVGVV HHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGVDAGSFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQGFEAQPTPEGVSRATT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH RTVVVASLAVLGLDFLLTAWMFSL HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]