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The map label for this gene is 89885867

Identifier: 89885867

GI number: 89885867

Start: 145716

End: 147485

Strand: Reverse

Name: 89885867

Synonym: Rfer_4381

Alternate gene names: NA

Gene position: 147485-145716 (Counterclockwise)

Preceding gene: 89885868

Following gene: 89885866

Centisome position: 57.29

GC content: 51.81

Gene sequence:

>1770_bases
ATGATTGAACGCCACCACAAGATAAGCCACCTTCGTAGAGACCTTTCCCGCACTTCAGATGGCAGATGGCTTGCTCAAGC
GCCTGGTGAAATGATTGATGGGTTCCTCTGCAGTCCTGCAGCACTTGCGTCTTGGGTTTACGAGGCAAAGCCTGAATTCC
TGGCAAAACCATCGCTTGGCGTGCTTATTCTTGGCTCCATGCTCGACGGGTTCGATGGTGGAGCGTGGTGGACTCTTTTC
TCGACCCTTTTGGGCAAGGGGTCGGGCTGGGCCAAATTCACAGTGATGGTTCCCGAAGATGAAGGTCCGATTCAGCGATC
CGGCCTGCCTCCTGCGCCTTTGGCGAGGTCTGTGCAAATTATTCGCGGAAATTTGTTTGCTCTTGCAAAAATGGAGCAGA
GCGAAATCGATGTTGTCTATTTGCCTTTTGGCAACCCGGATACATGGGTCCCAATCCTTCAGGATGATGCCCGTGGCCTG
TGGAGGTTTCTCAACCAGAATGCTTCCATAGTCATGGGGTTGATTGAGTCGAGTGACGCACCTCTTTGTATGGAGGTTGC
CAAGATGTACGAGCTGGATGTCCGGAGGATGTCCAATCGTTTTTACGCCCCCACTTCCGAGACAATGGCGCAAACCAAAG
AGTTGATTTCTGCCCACGGCAAAAAACCTGCAGATTTTGATTTGGCAGATGACCGCGCCACCAATCTGACGGAAGTGTCT
GACGTCATTAAGGACTTGTGCACCACTCTGCCAGGTGTTGAGCCCGAAGATTACCGGCTTTGGGGCATGAGATCGGTGAT
TAAGTCATCAGTTGATTCGCAAGACTTCTATATCTCCCTCCCGCGAAAACTCGCCGTGCGCGTGTCTACTGGGCGTATCT
ATCGCATCACAGATGATCTGGCCACAGGCGAGCCGCTTCGGTGCACATTCCCGCCAGGAGGTTTGACTGATTACCCAGGG
CCTGAGAGCCATTGGTCAGCCAAAGTCTTTTGGGCTGGTCGGGTCTGGGAGGGTGGACTCGGTAATTTTTACAATGACAC
TGTTGGCGCAGCATTTGACAAGCTTGGTTTGGGAGAGCTAAAAGTTGCTGAGTTCATCGACATGATCGGCGGGAACGAAG
ATCATGAGGGTTCGCAACGTTTGAAAAACGCCATGACGGGAGGCCAGAAATATAGCCCCACCCGCGATGAGCGATTCCTG
TTTGATATGGTCGATAAGCGCGATGAACAAGCCGTCTTGGCATTGGTACGCGAAAACAGGCAACTGCTGAATTCCTTCAA
TGAAGATCGCTTGCCTCTGTTGGTAATGCTCGGTCTGCGCAACATGCCAGAGACCATGGCCAAAGTAATTGATCTTGGCG
CCAATCCACGCGCTATAGACGGCGGAGAGCGTCCAATTTTAGTGGAGCTGGCCGGTCGTGGTAACCGAGATGTTGTGAAG
GCGATCCTAAACGCAGGCGTGTCGCCAAATTGCCAGGACGCCCTTGGCTGGACTCCGCTTTTATATTCAATGAAATCCCG
ACGTTGGGAGATTGTTCAGCTTCTATTGGACTGTGGTGCGGATACGCAGCTCGAAAATAGTTTTGGAGTAAGCCCGAAAG
GTATCGCTCTGGATCAAAAGACCAAAATGGATGATCTCGCTGAAATGGCGATGGACCTCATGGGCAAGCTCATGGACCCT
AAAACTATTGCTGCTTTGAAGGCTGCTGGGATGGAGCTCAAGTCAAGCGACATACCTCAACCCATTCGGGATCAGATACT
TGCGTCTTAA

Upstream 100 bases:

>100_bases
GCTCCATCCATCCAGCCACCGTGCAATCACTTTTGGCAGCTGGCGTGATTTGCAAAAGCATGGCGGGCGATTGCTCGCTT
GCCTGATCCCAAAGGAAAAC

Downstream 100 bases:

>100_bases
AGGAGATCATCTAGTGAACCAAACCGTGTTTTCCCCATACGCCCCGGTACGACTTCGAAATGAAGTCTGGTGGACGTTTG
CTATCCAGTCGGCTCAGAAT

Product: ankyrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MIERHHKISHLRRDLSRTSDGRWLAQAPGEMIDGFLCSPAALASWVYEAKPEFLAKPSLGVLILGSMLDGFDGGAWWTLF
STLLGKGSGWAKFTVMVPEDEGPIQRSGLPPAPLARSVQIIRGNLFALAKMEQSEIDVVYLPFGNPDTWVPILQDDARGL
WRFLNQNASIVMGLIESSDAPLCMEVAKMYELDVRRMSNRFYAPTSETMAQTKELISAHGKKPADFDLADDRATNLTEVS
DVIKDLCTTLPGVEPEDYRLWGMRSVIKSSVDSQDFYISLPRKLAVRVSTGRIYRITDDLATGEPLRCTFPPGGLTDYPG
PESHWSAKVFWAGRVWEGGLGNFYNDTVGAAFDKLGLGELKVAEFIDMIGGNEDHEGSQRLKNAMTGGQKYSPTRDERFL
FDMVDKRDEQAVLALVRENRQLLNSFNEDRLPLLVMLGLRNMPETMAKVIDLGANPRAIDGGERPILVELAGRGNRDVVK
AILNAGVSPNCQDALGWTPLLYSMKSRRWEIVQLLLDCGADTQLENSFGVSPKGIALDQKTKMDDLAEMAMDLMGKLMDP
KTIAALKAAGMELKSSDIPQPIRDQILAS

Sequences:

>Translated_589_residues
MIERHHKISHLRRDLSRTSDGRWLAQAPGEMIDGFLCSPAALASWVYEAKPEFLAKPSLGVLILGSMLDGFDGGAWWTLF
STLLGKGSGWAKFTVMVPEDEGPIQRSGLPPAPLARSVQIIRGNLFALAKMEQSEIDVVYLPFGNPDTWVPILQDDARGL
WRFLNQNASIVMGLIESSDAPLCMEVAKMYELDVRRMSNRFYAPTSETMAQTKELISAHGKKPADFDLADDRATNLTEVS
DVIKDLCTTLPGVEPEDYRLWGMRSVIKSSVDSQDFYISLPRKLAVRVSTGRIYRITDDLATGEPLRCTFPPGGLTDYPG
PESHWSAKVFWAGRVWEGGLGNFYNDTVGAAFDKLGLGELKVAEFIDMIGGNEDHEGSQRLKNAMTGGQKYSPTRDERFL
FDMVDKRDEQAVLALVRENRQLLNSFNEDRLPLLVMLGLRNMPETMAKVIDLGANPRAIDGGERPILVELAGRGNRDVVK
AILNAGVSPNCQDALGWTPLLYSMKSRRWEIVQLLLDCGADTQLENSFGVSPKGIALDQKTKMDDLAEMAMDLMGKLMDP
KTIAALKAAGMELKSSDIPQPIRDQILAS
>Mature_589_residues
MIERHHKISHLRRDLSRTSDGRWLAQAPGEMIDGFLCSPAALASWVYEAKPEFLAKPSLGVLILGSMLDGFDGGAWWTLF
STLLGKGSGWAKFTVMVPEDEGPIQRSGLPPAPLARSVQIIRGNLFALAKMEQSEIDVVYLPFGNPDTWVPILQDDARGL
WRFLNQNASIVMGLIESSDAPLCMEVAKMYELDVRRMSNRFYAPTSETMAQTKELISAHGKKPADFDLADDRATNLTEVS
DVIKDLCTTLPGVEPEDYRLWGMRSVIKSSVDSQDFYISLPRKLAVRVSTGRIYRITDDLATGEPLRCTFPPGGLTDYPG
PESHWSAKVFWAGRVWEGGLGNFYNDTVGAAFDKLGLGELKVAEFIDMIGGNEDHEGSQRLKNAMTGGQKYSPTRDERFL
FDMVDKRDEQAVLALVRENRQLLNSFNEDRLPLLVMLGLRNMPETMAKVIDLGANPRAIDGGERPILVELAGRGNRDVVK
AILNAGVSPNCQDALGWTPLLYSMKSRRWEIVQLLLDCGADTQLENSFGVSPKGIALDQKTKMDDLAEMAMDLMGKLMDP
KTIAALKAAGMELKSSDIPQPIRDQILAS

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65145; Mature: 65145

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERHHKISHLRRDLSRTSDGRWLAQAPGEMIDGFLCSPAALASWVYEAKPEFLAKPSLG
CCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHCCHHCCHHHHHHHHHHCCHHHHCCCCCC
VLILGSMLDGFDGGAWWTLFSTLLGKGSGWAKFTVMVPEDEGPIQRSGLPPAPLARSVQI
CEEHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHH
IRGNLFALAKMEQSEIDVVYLPFGNPDTWVPILQDDARGLWRFLNQNASIVMGLIESSDA
HHCCCCEEEECCCCCCCEEEEECCCCCCEEEEECHHHHHHHHHHCCCCEEEEEEECCCCC
PLCMEVAKMYELDVRRMSNRFYAPTSETMAQTKELISAHGKKPADFDLADDRATNLTEVS
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
DVIKDLCTTLPGVEPEDYRLWGMRSVIKSSVDSQDFYISLPRKLAVRVSTGRIYRITDDL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCEEEEEECCC
ATGEPLRCTFPPGGLTDYPGPESHWSAKVFWAGRVWEGGLGNFYNDTVGAAFDKLGLGEL
CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCH
KVAEFIDMIGGNEDHEGSQRLKNAMTGGQKYSPTRDERFLFDMVDKRDEQAVLALVRENR
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
QLLNSFNEDRLPLLVMLGLRNMPETMAKVIDLGANPRAIDGGERPILVELAGRGNRDVVK
HHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHH
AILNAGVSPNCQDALGWTPLLYSMKSRRWEIVQLLLDCGADTQLENSFGVSPKGIALDQK
HHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCC
TKMDDLAEMAMDLMGKLMDPKTIAALKAAGMELKSSDIPQPIRDQILAS
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MIERHHKISHLRRDLSRTSDGRWLAQAPGEMIDGFLCSPAALASWVYEAKPEFLAKPSLG
CCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHCCHHCCHHHHHHHHHHCCHHHHCCCCCC
VLILGSMLDGFDGGAWWTLFSTLLGKGSGWAKFTVMVPEDEGPIQRSGLPPAPLARSVQI
CEEHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHH
IRGNLFALAKMEQSEIDVVYLPFGNPDTWVPILQDDARGLWRFLNQNASIVMGLIESSDA
HHCCCCEEEECCCCCCCEEEEECCCCCCEEEEECHHHHHHHHHHCCCCEEEEEEECCCCC
PLCMEVAKMYELDVRRMSNRFYAPTSETMAQTKELISAHGKKPADFDLADDRATNLTEVS
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
DVIKDLCTTLPGVEPEDYRLWGMRSVIKSSVDSQDFYISLPRKLAVRVSTGRIYRITDDL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCEEEEEECCC
ATGEPLRCTFPPGGLTDYPGPESHWSAKVFWAGRVWEGGLGNFYNDTVGAAFDKLGLGEL
CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCH
KVAEFIDMIGGNEDHEGSQRLKNAMTGGQKYSPTRDERFLFDMVDKRDEQAVLALVRENR
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
QLLNSFNEDRLPLLVMLGLRNMPETMAKVIDLGANPRAIDGGERPILVELAGRGNRDVVK
HHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHH
AILNAGVSPNCQDALGWTPLLYSMKSRRWEIVQLLLDCGADTQLENSFGVSPKGIALDQK
HHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCC
TKMDDLAEMAMDLMGKLMDPKTIAALKAAGMELKSSDIPQPIRDQILAS
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA