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The map label for this gene is 89885866

Identifier: 89885866

GI number: 89885866

Start: 144560

End: 145702

Strand: Reverse

Name: 89885866

Synonym: Rfer_4380

Alternate gene names: NA

Gene position: 145702-144560 (Counterclockwise)

Preceding gene: 89885867

Following gene: 89885865

Centisome position: 56.59

GC content: 53.72

Gene sequence:

>1143_bases
GTGAACCAAACCGTGTTTTCCCCATACGCCCCGGTACGACTTCGAAATGAAGTCTGGTGGACGTTTGCTATCCAGTCGGC
TCAGAATGGATTGGTCGCCCCGAATGGACAAATTGCAAGAAACCTGCCCGACATCATCATGCGCGAATTGATCGCTCCCA
TGATGGCCGCAGCGCAACGGAATGCGAATGACGATGGTAATGATGCCTACATGGGCCAGCTTTACGCCAAGTTGCTCCAA
CAGCGCCATTGGGTGCCAATGGTGGGGCAATACCACCTAAGTGGGAAGCAGATATTCGATCTGGACGACAACATTGTCTC
GATGCTTCGCAATACGGACGTGGCCGACTGCACTCTTAACGAATGGCACCCGCCCTATGACGCGTTTTTTGTGCGCTTCG
GTAAACAGGAGGACATGAATCTCCAGTTCGACGATGGTCACGAGTATCTGGACGGCGCATTTGTGGCGGTGACACCGTGG
ACACCGGAAGGCCCAGAGCGCCGGTTGAAAATCGGTCTGACAACGGTCAAGGATGATGGCTCCGGGGTAATGATGCCTGG
ATACTTTATCGACTTTACGCCGGGTGAGCAACGCCTGTCCCCCCATGCAGCTGTAGATGCATTCATTGCTCGCAAGTTTG
CTGACCTCGATTCTGACGAAGACAAAAGTGAAAGCAACAAGGCCCTGATTGAGATTCGAAAGGGTGAGTTGAAAGAAGGC
GCGGATTTGCTTCGGAAGGCTACGGAGCTGGTCGTTAACTGTCTTTTCTATATCGAATCCATGGGAGCGAACAAGGAGTT
GTCGCCTGGTCGGGATGTCCCGGTTGAACTCCTTGTGAAATGGCAACAATCACCTCAATTGCGCCGGTACAAGGTCGCCC
AAAAAATCGGCAGCGAAGGCTACGCGATGGTTCGCATGATGGGAGACGAAGTTCAGCCAGGAATCGGATCGACAGGTGGC
AACCGAGCAGATGTCAGCACCCACTGGCGAAGAGGGCACTGGCGTCGCCAAGCCCATGGCCCGCAAAAATCCCTCATGAA
GCGAGTCTGGATAAGGCCAGTGATGGTGAACCCATCGAAACCTCACGAAGAGTTGCCAGGGCACGTCTATGCTGTGGGTG
GCGATGGTAAAAACGTTCATTGA

Upstream 100 bases:

>100_bases
ACTATTGCTGCTTTGAAGGCTGCTGGGATGGAGCTCAAGTCAAGCGACATACCTCAACCCATTCGGGATCAGATACTTGC
GTCTTAAAGGAGATCATCTA

Downstream 100 bases:

>100_bases
ACCATAGGAAATTATTATGAATTCCACGGTGAGAATCATCAGCGGCCTTATGCTCCTTACGGGCTTGGGGTTTTGCGGGC
TTTGGCTTCTTGCGAGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNQTVFSPYAPVRLRNEVWWTFAIQSAQNGLVAPNGQIARNLPDIIMRELIAPMMAAAQRNANDDGNDAYMGQLYAKLLQ
QRHWVPMVGQYHLSGKQIFDLDDNIVSMLRNTDVADCTLNEWHPPYDAFFVRFGKQEDMNLQFDDGHEYLDGAFVAVTPW
TPEGPERRLKIGLTTVKDDGSGVMMPGYFIDFTPGEQRLSPHAAVDAFIARKFADLDSDEDKSESNKALIEIRKGELKEG
ADLLRKATELVVNCLFYIESMGANKELSPGRDVPVELLVKWQQSPQLRRYKVAQKIGSEGYAMVRMMGDEVQPGIGSTGG
NRADVSTHWRRGHWRRQAHGPQKSLMKRVWIRPVMVNPSKPHEELPGHVYAVGGDGKNVH

Sequences:

>Translated_380_residues
MNQTVFSPYAPVRLRNEVWWTFAIQSAQNGLVAPNGQIARNLPDIIMRELIAPMMAAAQRNANDDGNDAYMGQLYAKLLQ
QRHWVPMVGQYHLSGKQIFDLDDNIVSMLRNTDVADCTLNEWHPPYDAFFVRFGKQEDMNLQFDDGHEYLDGAFVAVTPW
TPEGPERRLKIGLTTVKDDGSGVMMPGYFIDFTPGEQRLSPHAAVDAFIARKFADLDSDEDKSESNKALIEIRKGELKEG
ADLLRKATELVVNCLFYIESMGANKELSPGRDVPVELLVKWQQSPQLRRYKVAQKIGSEGYAMVRMMGDEVQPGIGSTGG
NRADVSTHWRRGHWRRQAHGPQKSLMKRVWIRPVMVNPSKPHEELPGHVYAVGGDGKNVH
>Mature_380_residues
MNQTVFSPYAPVRLRNEVWWTFAIQSAQNGLVAPNGQIARNLPDIIMRELIAPMMAAAQRNANDDGNDAYMGQLYAKLLQ
QRHWVPMVGQYHLSGKQIFDLDDNIVSMLRNTDVADCTLNEWHPPYDAFFVRFGKQEDMNLQFDDGHEYLDGAFVAVTPW
TPEGPERRLKIGLTTVKDDGSGVMMPGYFIDFTPGEQRLSPHAAVDAFIARKFADLDSDEDKSESNKALIEIRKGELKEG
ADLLRKATELVVNCLFYIESMGANKELSPGRDVPVELLVKWQQSPQLRRYKVAQKIGSEGYAMVRMMGDEVQPGIGSTGG
NRADVSTHWRRGHWRRQAHGPQKSLMKRVWIRPVMVNPSKPHEELPGHVYAVGGDGKNVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42844; Mature: 42844

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTVFSPYAPVRLRNEVWWTFAIQSAQNGLVAPNGQIARNLPDIIMRELIAPMMAAAQR
CCCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHC
NANDDGNDAYMGQLYAKLLQQRHWVPMVGQYHLSGKQIFDLDDNIVSMLRNTDVADCTLN
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCHHHHHHHHCCCCCCCCCC
EWHPPYDAFFVRFGKQEDMNLQFDDGHEYLDGAFVAVTPWTPEGPERRLKIGLTTVKDDG
CCCCCHHHHHEEECCCCCCCEEECCCCHHHCCEEEEEECCCCCCCCCEEEEEEEEEEECC
SGVMMPGYFIDFTPGEQRLSPHAAVDAFIARKFADLDSDEDKSESNKALIEIRKGELKEG
CEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHH
ADLLRKATELVVNCLFYIESMGANKELSPGRDVPVELLVKWQQSPQLRRYKVAQKIGSEG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCCC
YAMVRMMGDEVQPGIGSTGGNRADVSTHWRRGHWRRQAHGPQKSLMKRVWIRPVMVNPSK
EEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCHHHHHHHHHCCEEEECCCC
PHEELPGHVYAVGGDGKNVH
CHHHCCCEEEEECCCCCCCC
>Mature Secondary Structure
MNQTVFSPYAPVRLRNEVWWTFAIQSAQNGLVAPNGQIARNLPDIIMRELIAPMMAAAQR
CCCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHC
NANDDGNDAYMGQLYAKLLQQRHWVPMVGQYHLSGKQIFDLDDNIVSMLRNTDVADCTLN
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCHHHHHHHHCCCCCCCCCC
EWHPPYDAFFVRFGKQEDMNLQFDDGHEYLDGAFVAVTPWTPEGPERRLKIGLTTVKDDG
CCCCCHHHHHEEECCCCCCCEEECCCCHHHCCEEEEEECCCCCCCCCEEEEEEEEEEECC
SGVMMPGYFIDFTPGEQRLSPHAAVDAFIARKFADLDSDEDKSESNKALIEIRKGELKEG
CEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHH
ADLLRKATELVVNCLFYIESMGANKELSPGRDVPVELLVKWQQSPQLRRYKVAQKIGSEG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCCC
YAMVRMMGDEVQPGIGSTGGNRADVSTHWRRGHWRRQAHGPQKSLMKRVWIRPVMVNPSK
EEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCHHHHHHHHHCCEEEECCCC
PHEELPGHVYAVGGDGKNVH
CHHHCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA