Definition | Rhodoferax ferrireducens T118 plasmid1, complete sequence. |
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Accession | NC_007901 |
Length | 257,447 |
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The map label for this gene is 89885868
Identifier: 89885868
GI number: 89885868
Start: 147688
End: 147936
Strand: Reverse
Name: 89885868
Synonym: Rfer_4382
Alternate gene names: NA
Gene position: 147936-147688 (Counterclockwise)
Preceding gene: 89885869
Following gene: 89885867
Centisome position: 57.46
GC content: 59.84
Gene sequence:
>249_bases ATGTCTCGTTGCATTACAGACGTTGTACCCGCCTTGGCCGACCTGCCATGGGACACTGCTACGGCCATCGAGGTCGAGCC TCCAGTGGCGGCTGAGATTCGCGCTGATTGCGCTTTCTACATTGACCCAAAGGCAGTCGACGCAACGGCGGGAGAGCGGG CAGCATACCGCGCTTTGCTCCACCAGATCGACGCAGCAACATGCTGCGAGGTAACACCTGAAGGAGCCCGACCATGCCGA AAAGCCTGA
Upstream 100 bases:
>100_bases CGCGCGGTGGTCAGGCTCGACCGAAAAGACGTGACTTAATACGGAACCAAAGGAAATCATCGTGCGCCTGGCTATCACAC CAACAATTCGCAATGAATGG
Downstream 100 bases:
>100_bases GTGAACCGCAACAATCGCTGGTCAGCAAGTTGAAGTCTGGAGCGAAGCTGCACCACGACCAGGCGACTGGATTGTTTCGT CTCCACGATGGCCCGTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSRCITDVVPALADLPWDTATAIEVEPPVAAEIRADCAFYIDPKAVDATAGERAAYRALLHQIDAATCCEVTPEGARPCR KA
Sequences:
>Translated_82_residues MSRCITDVVPALADLPWDTATAIEVEPPVAAEIRADCAFYIDPKAVDATAGERAAYRALLHQIDAATCCEVTPEGARPCR KA >Mature_81_residues SRCITDVVPALADLPWDTATAIEVEPPVAAEIRADCAFYIDPKAVDATAGERAAYRALLHQIDAATCCEVTPEGARPCRK A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8744; Mature: 8613
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRCITDVVPALADLPWDTATAIEVEPPVAAEIRADCAFYIDPKAVDATAGERAAYRALL CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH HQIDAATCCEVTPEGARPCRKA HHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRCITDVVPALADLPWDTATAIEVEPPVAAEIRADCAFYIDPKAVDATAGERAAYRALL CCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH HQIDAATCCEVTPEGARPCRKA HHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA