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The map label for this gene is cphB [H]

Identifier: 89256712

GI number: 89256712

Start: 1349099

End: 1349917

Strand: Reverse

Name: cphB [H]

Synonym: FTL_1419

Alternate gene names: 89256712

Gene position: 1349917-1349099 (Counterclockwise)

Preceding gene: 89256714

Following gene: 89256711

Centisome position: 71.2

GC content: 37.73

Gene sequence:

>819_bases
ATGCCTTCTAAGCCAGTGAAAAAAGACCACCGTGGGTATATAATGCCGATTGGTGGTGGCGAAGATAAGTTCGCAAGCCC
TACTGTTCTAGAGAAATTTGTCCAGTTATCAGGTGGTACTGAAGCAAAAATTGCTGTTATTCCAACAGCATCAAAACTTC
CAGATACAGGAGATATTTATGTAGATATATTTACAAAAATGGGAGTCAAAGAAGTACATAACCTAAAAATAGAAACACGT
CTAGATGCTACTACTAATAAAGAATATCAAGATATACTTTCTCAGTGTACGGGTATCTTTATGACTGGAGGTAACCAGCT
TTTACTTTCAACTACTCTTGGTGGCACGCCAGTAGCACAACTTATTCGTAGATTAAATGCAAAGGGTGTAAATGTTGCTG
GTACTTCAGCAGGTGCGGCGTTTATATCAGGGTTTATGATCGCGGGTGGTCAAGCAGGACTTATGCCTAGATGTAATATG
GTTAATCTAGCCCCTGGCTTAGGTTTGACAAATAAACTTCTAGTAGATCAGCATTTCTCTCAAAGAGATAGGCTAGGCAG
GCTTTTAGCAGCACTTTCATATAATCCATACATGGTTGGTGTAGGTATAGATGAAGATACTTCAGCTTTATTGAACTTTG
AAAATGTTATAGAAGTTGTTGGTTCAGGTATGGTGACAATTATAGATTTCTCTCATCTTAAGCACTCATCACTACATAAC
GCGCGTAACAATGCGCCAATTAGCTTGGTTGATATTCGTATGCATATGTTATTAGAAGGTCAAAAATTTGATCTAAATAC
TTGTCTAGTAGAATTTTAA

Upstream 100 bases:

>100_bases
AAATAAACCTTTTTATAGAAATGTTTTTAATTAATTAGTATTATTTTAGCAAAATGCTATTAGTATATTCGATTTAATAT
TATTAAAGGAGATTTTTAAG

Downstream 100 bases:

>100_bases
TATTCTATATTCTGTTGTTCTTTTAGACTATTATCATATTCTAAACTCTATCAATTGCTTAATATAGTTATCTATCTTGA
CTACTTGATAAAAATATAAT

Product: cyanophycinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MPSKPVKKDHRGYIMPIGGGEDKFASPTVLEKFVQLSGGTEAKIAVIPTASKLPDTGDIYVDIFTKMGVKEVHNLKIETR
LDATTNKEYQDILSQCTGIFMTGGNQLLLSTTLGGTPVAQLIRRLNAKGVNVAGTSAGAAFISGFMIAGGQAGLMPRCNM
VNLAPGLGLTNKLLVDQHFSQRDRLGRLLAALSYNPYMVGVGIDEDTSALLNFENVIEVVGSGMVTIIDFSHLKHSSLHN
ARNNAPISLVDIRMHMLLEGQKFDLNTCLVEF

Sequences:

>Translated_272_residues
MPSKPVKKDHRGYIMPIGGGEDKFASPTVLEKFVQLSGGTEAKIAVIPTASKLPDTGDIYVDIFTKMGVKEVHNLKIETR
LDATTNKEYQDILSQCTGIFMTGGNQLLLSTTLGGTPVAQLIRRLNAKGVNVAGTSAGAAFISGFMIAGGQAGLMPRCNM
VNLAPGLGLTNKLLVDQHFSQRDRLGRLLAALSYNPYMVGVGIDEDTSALLNFENVIEVVGSGMVTIIDFSHLKHSSLHN
ARNNAPISLVDIRMHMLLEGQKFDLNTCLVEF
>Mature_271_residues
PSKPVKKDHRGYIMPIGGGEDKFASPTVLEKFVQLSGGTEAKIAVIPTASKLPDTGDIYVDIFTKMGVKEVHNLKIETRL
DATTNKEYQDILSQCTGIFMTGGNQLLLSTTLGGTPVAQLIRRLNAKGVNVAGTSAGAAFISGFMIAGGQAGLMPRCNMV
NLAPGLGLTNKLLVDQHFSQRDRLGRLLAALSYNPYMVGVGIDEDTSALLNFENVIEVVGSGMVTIIDFSHLKHSSLHNA
RNNAPISLVDIRMHMLLEGQKFDLNTCLVEF

Specific function: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides [H]

COG id: COG4242

COG function: function code QP; Cyanophycinase and related exopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320
- InterPro:   IPR011811 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: =3.4.15.6 [H]

Molecular weight: Translated: 29303; Mature: 29172

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKPVKKDHRGYIMPIGGGEDKFASPTVLEKFVQLSGGTEAKIAVIPTASKLPDTGDIY
CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEE
VDIFTKMGVKEVHNLKIETRLDATTNKEYQDILSQCTGIFMTGGNQLLLSTTLGGTPVAQ
EEEEHHCCHHHHHCEEEEEEECCCCCHHHHHHHHHCCEEEEECCCEEEEEEECCCCHHHH
LIRRLNAKGVNVAGTSAGAAFISGFMIAGGQAGLMPRCNMVNLAPGLGLTNKLLVDQHFS
HHHHHCCCCCEEECCCCHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH
QRDRLGRLLAALSYNPYMVGVGIDEDTSALLNFENVIEVVGSGMVTIIDFSHLKHSSLHN
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHC
ARNNAPISLVDIRMHMLLEGQKFDLNTCLVEF
CCCCCCEEEEEEEEEHHCCCCCCCCCEEEEEC
>Mature Secondary Structure 
PSKPVKKDHRGYIMPIGGGEDKFASPTVLEKFVQLSGGTEAKIAVIPTASKLPDTGDIY
CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEE
VDIFTKMGVKEVHNLKIETRLDATTNKEYQDILSQCTGIFMTGGNQLLLSTTLGGTPVAQ
EEEEHHCCHHHHHCEEEEEEECCCCCHHHHHHHHHCCEEEEECCCEEEEEEECCCCHHHH
LIRRLNAKGVNVAGTSAGAAFISGFMIAGGQAGLMPRCNMVNLAPGLGLTNKLLVDQHFS
HHHHHCCCCCEEECCCCHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH
QRDRLGRLLAALSYNPYMVGVGIDEDTSALLNFENVIEVVGSGMVTIIDFSHLKHSSLHN
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHC
ARNNAPISLVDIRMHMLLEGQKFDLNTCLVEF
CCCCCCEEEEEEEEEHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11131019 [H]