Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256714
Identifier: 89256714
GI number: 89256714
Start: 1351508
End: 1352170
Strand: Reverse
Name: 89256714
Synonym: FTL_1421
Alternate gene names: NA
Gene position: 1352170-1351508 (Counterclockwise)
Preceding gene: 89256715
Following gene: 89256712
Centisome position: 71.32
GC content: 30.47
Gene sequence:
>663_bases ATGAAAACCTATATTTTTGATCTTGATAACACACTTTATTCTTACAAAAATGGTTTATTTGATAGCCAAATGGCGAGAAT GAGTGAGTATATTAAACTAAAACTAAATATCTCAGATATCGAAAAAGCAAACGCAATACGTGATGAGCTATACTATGAGT TTGGTTCAACTATGCTTGGGATGATGCGTTATCATAATATCGAGCCAAAAGAGTTTCTTGATTATATTGATAATATTGAG ATTAGTCATTTTGAGCCTAATCAAAAGCTAAACAAATATATTAATGATTTAAGAAAAAATAATCGTACTTATATTTTTAC TAATGCCTCTGATTTTCATGCTAGTAGAGTACTTAAGCAACTTGGTCTAGATAATAGTTTTGATGGAGTTCTAACTATTG AAGATACTGGTTTAGTCTCTAAGCCAAAGACTAAGTACTTTGAGATAGGCAGAGATAAGTTTGATATTGATTTTACTAGT GCAATTTTCTTTGAAGATTCATCACATAATTTAGTTCCAGCTAAGCATTTAGGTATGCAGACAGTATTAGTCCATGCAGA TGATCATAAGTCAGAGGCTAATTTTTATGATAATCAAGAGATTGATTATTATGTAGCAGATGTTGAGTCATTTTTTGAGG GTAAGTATTTGGCTAGGAGATAA
Upstream 100 bases:
>100_bases TTTAGTAAGAGCAAAACAGTTTAACTGGGATCAAACAGCAAATATTGTCCAAGATGAGCTTAAAAAGCTTAATTTATTAT AGAAAATTTTAAGGAATGAA
Downstream 100 bases:
>100_bases TATATAGCCATGATTCTAGAGATTCCTTCCTACAAGAGAATTACAAAAATGTATAGTCACACCTATTAAGTCGGGTATCT CTCCAGTATTTAAGAGAGCC
Product: haloacid dehalogenase-like hydrolase family protein
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Phosphatase; Hydrolase Protein; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Protein; HAD Family Hydrolase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; HAD Superfamily Hydrolase; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily; Haloacid Dehalogenase
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKTYIFDLDNTLYSYKNGLFDSQMARMSEYIKLKLNISDIEKANAIRDELYYEFGSTMLGMMRYHNIEPKEFLDYIDNIE ISHFEPNQKLNKYINDLRKNNRTYIFTNASDFHASRVLKQLGLDNSFDGVLTIEDTGLVSKPKTKYFEIGRDKFDIDFTS AIFFEDSSHNLVPAKHLGMQTVLVHADDHKSEANFYDNQEIDYYVADVESFFEGKYLARR
Sequences:
>Translated_220_residues MKTYIFDLDNTLYSYKNGLFDSQMARMSEYIKLKLNISDIEKANAIRDELYYEFGSTMLGMMRYHNIEPKEFLDYIDNIE ISHFEPNQKLNKYINDLRKNNRTYIFTNASDFHASRVLKQLGLDNSFDGVLTIEDTGLVSKPKTKYFEIGRDKFDIDFTS AIFFEDSSHNLVPAKHLGMQTVLVHADDHKSEANFYDNQEIDYYVADVESFFEGKYLARR >Mature_220_residues MKTYIFDLDNTLYSYKNGLFDSQMARMSEYIKLKLNISDIEKANAIRDELYYEFGSTMLGMMRYHNIEPKEFLDYIDNIE ISHFEPNQKLNKYINDLRKNNRTYIFTNASDFHASRVLKQLGLDNSFDGVLTIEDTGLVSKPKTKYFEIGRDKFDIDFTS AIFFEDSSHNLVPAKHLGMQTVLVHADDHKSEANFYDNQEIDYYVADVESFFEGKYLARR
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321214, Length=193, Percent_Identity=27.979274611399, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320875, Length=209, Percent_Identity=26.7942583732057, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25858; Mature: 25858
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYIFDLDNTLYSYKNGLFDSQMARMSEYIKLKLNISDIEKANAIRDELYYEFGSTMLG CCEEEEECCCHHHHHHCCCCHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH MMRYHNIEPKEFLDYIDNIEISHFEPNQKLNKYINDLRKNNRTYIFTNASDFHASRVLKQ HHHHCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH LGLDNSFDGVLTIEDTGLVSKPKTKYFEIGRDKFDIDFTSAIFFEDSSHNLVPAKHLGMQ HCCCCCCCCEEEEECCCCCCCCCCHHEECCCCEECEEEEEEEEEECCCCCCCCHHHCCEE TVLVHADDHKSEANFYDNQEIDYYVADVESFFEGKYLARR EEEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCHHCCC >Mature Secondary Structure MKTYIFDLDNTLYSYKNGLFDSQMARMSEYIKLKLNISDIEKANAIRDELYYEFGSTMLG CCEEEEECCCHHHHHHCCCCHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH MMRYHNIEPKEFLDYIDNIEISHFEPNQKLNKYINDLRKNNRTYIFTNASDFHASRVLKQ HHHHCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH LGLDNSFDGVLTIEDTGLVSKPKTKYFEIGRDKFDIDFTSAIFFEDSSHNLVPAKHLGMQ HCCCCCCCCEEEEECCCCCCCCCCHHEECCCCEECEEEEEEEEEECCCCCCCCHHHCCEE TVLVHADDHKSEANFYDNQEIDYYVADVESFFEGKYLARR EEEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA