Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is ybeZ [H]
Identifier: 89256243
GI number: 89256243
Start: 863187
End: 864170
Strand: Reverse
Name: ybeZ [H]
Synonym: FTL_0885
Alternate gene names: 89256243
Gene position: 864170-863187 (Counterclockwise)
Preceding gene: 89256244
Following gene: 89256242
Centisome position: 45.58
GC content: 36.48
Gene sequence:
>984_bases ATGAATAAAACTCAATTTATTCTTGAACCTTATAACTACGATGCAATGATGCTACTTTGTGGCAACCTTGATGAAAATAT TCGTGCTGTCGAAAATTATTTTGATGTCGAGATTCGGCATCGTGCCGATGAGTTTGAGATCACTAGTGATTCAAGCACTA ACAATACCCAGGCGAAAAGATTTATCAAATCTTGCTATGCTGAGATTCTAGCTGGCAATACTGAATTTGATTTAGAGCAG ATTACAACTATCCTTAATGCTACTGCTAAAGATAAAGCTGCTGCAACTGCTAAGTCACGTAAAAAAGTTGAAGAAGCTGA AGTTCAAATGAGAAGCAAAAAACTCAAAGCGCGTACACACAATCAAGCAATATACTTAGAAAATATCAAAAACAACTTTG TCACATTTGGTGTTGGTCCTGCTGGTACAGGTAAAACCTACATGGCGATTGCTTGTGCTGTAGCAGCTTATGAGAAAGGC GAAGTTAGAAGAATTGTACTAGTGCGCCCTGCTGTTGAGGCTGGTGAGAAATTGGGGTTTTTACCAGGTGATCTAGCCCA AAAGATTGATCCATATCTGCGCCCTATGTATGATGCTTTATTTGATTTTATGGGATTAGAGAAAGTCACCAAGCTAATAG AAAAACAAGCTATCGAGATTGCTCCACTAGCATATATGCGTGGTAGAACAATCAATGATTCTTTCATTGTCCTTGACGAA AGCCAAAATACGACAAAAGAGCAAATGAAAATGTTCTTAACAAGGATTGGTTTTAATACTACAGCAGTTATAACAGGTGA TATCACTCAAGTAGATTTACCAAAAAATGTCACATCAGGATTAAGCCATGCCTTATCAATTCTTAATGATATCGAAGGTG TAGCTATTAGCTACCTGAAATCAGTTGATATTGTCCGCCATCAAATAGTTCAAAAAATAATTAATGCTTATGATAAGCAT GAAGAGAAAACTAAAAATGGATAA
Upstream 100 bases:
>100_bases TGTTAACTTTAAGGGTGATAAATCTTTGATTGGTCAGTTCGCTATGGTTAAAATAACTGAAAGCCTTCCAAACTCTCTTA GAGGAGAACTTATTTAACCT
Downstream 100 bases:
>100_bases TCTAAATATAAATTTCATCAATGATGACGAACACCCCATACCTAGTCAAGATTTACTGCTAAAATGCCTACAACTTGTAG CTGACAAACATCATATCAGT
Product: phoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MNKTQFILEPYNYDAMMLLCGNLDENIRAVENYFDVEIRHRADEFEITSDSSTNNTQAKRFIKSCYAEILAGNTEFDLEQ ITTILNATAKDKAAATAKSRKKVEEAEVQMRSKKLKARTHNQAIYLENIKNNFVTFGVGPAGTGKTYMAIACAVAAYEKG EVRRIVLVRPAVEAGEKLGFLPGDLAQKIDPYLRPMYDALFDFMGLEKVTKLIEKQAIEIAPLAYMRGRTINDSFIVLDE SQNTTKEQMKMFLTRIGFNTTAVITGDITQVDLPKNVTSGLSHALSILNDIEGVAISYLKSVDIVRHQIVQKIINAYDKH EEKTKNG
Sequences:
>Translated_327_residues MNKTQFILEPYNYDAMMLLCGNLDENIRAVENYFDVEIRHRADEFEITSDSSTNNTQAKRFIKSCYAEILAGNTEFDLEQ ITTILNATAKDKAAATAKSRKKVEEAEVQMRSKKLKARTHNQAIYLENIKNNFVTFGVGPAGTGKTYMAIACAVAAYEKG EVRRIVLVRPAVEAGEKLGFLPGDLAQKIDPYLRPMYDALFDFMGLEKVTKLIEKQAIEIAPLAYMRGRTINDSFIVLDE SQNTTKEQMKMFLTRIGFNTTAVITGDITQVDLPKNVTSGLSHALSILNDIEGVAISYLKSVDIVRHQIVQKIINAYDKH EEKTKNG >Mature_327_residues MNKTQFILEPYNYDAMMLLCGNLDENIRAVENYFDVEIRHRADEFEITSDSSTNNTQAKRFIKSCYAEILAGNTEFDLEQ ITTILNATAKDKAAATAKSRKKVEEAEVQMRSKKLKARTHNQAIYLENIKNNFVTFGVGPAGTGKTYMAIACAVAAYEKG EVRRIVLVRPAVEAGEKLGFLPGDLAQKIDPYLRPMYDALFDFMGLEKVTKLIEKQAIEIAPLAYMRGRTINDSFIVLDE SQNTTKEQMKMFLTRIGFNTTAVITGDITQVDLPKNVTSGLSHALSILNDIEGVAISYLKSVDIVRHQIVQKIINAYDKH EEKTKNG
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=328, Percent_Identity=51.5243902439024, Blast_Score=327, Evalue=5e-91, Organism=Escherichia coli, GI1787257, Length=203, Percent_Identity=45.320197044335, Blast_Score=186, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36680; Mature: 36680
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTQFILEPYNYDAMMLLCGNLDENIRAVENYFDVEIRHRADEFEITSDSSTNNTQAKR CCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCEEEECCCCCCHHHHHH FIKSCYAEILAGNTEFDLEQITTILNATAKDKAAATAKSRKKVEEAEVQMRSKKLKARTH HHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQAIYLENIKNNFVTFGVGPAGTGKTYMAIACAVAAYEKGEVRRIVLVRPAVEAGEKLGF CCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCC LPGDLAQKIDPYLRPMYDALFDFMGLEKVTKLIEKQAIEIAPLAYMRGRTINDSFIVLDE CCCHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC SQNTTKEQMKMFLTRIGFNTTAVITGDITQVDLPKNVTSGLSHALSILNDIEGVAISYLK CCCCHHHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVDIVRHQIVQKIINAYDKHEEKTKNG HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKTQFILEPYNYDAMMLLCGNLDENIRAVENYFDVEIRHRADEFEITSDSSTNNTQAKR CCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCEEEECCCCCCHHHHHH FIKSCYAEILAGNTEFDLEQITTILNATAKDKAAATAKSRKKVEEAEVQMRSKKLKARTH HHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQAIYLENIKNNFVTFGVGPAGTGKTYMAIACAVAAYEKGEVRRIVLVRPAVEAGEKLGF CCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCC LPGDLAQKIDPYLRPMYDALFDFMGLEKVTKLIEKQAIEIAPLAYMRGRTINDSFIVLDE CCCHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC SQNTTKEQMKMFLTRIGFNTTAVITGDITQVDLPKNVTSGLSHALSILNDIEGVAISYLK CCCCHHHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVDIVRHQIVQKIINAYDKHEEKTKNG HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]