Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054609
Identifier: 89054609
GI number: 89054609
Start: 2126562
End: 2128235
Strand: Reverse
Name: 89054609
Synonym: Jann_2118
Alternate gene names: NA
Gene position: 2128235-2126562 (Counterclockwise)
Preceding gene: 89054613
Following gene: 89054608
Centisome position: 49.29
GC content: 62.9
Gene sequence:
>1674_bases ATGAAAGTCGAACTCTACAAACGTCTTGTCGCGGCCCAGGTAAGCCGTCGAACAATGCTCAAAGGGGCGGCCAGCGTCAG CGCATTGGCCGCATCCAGCGGCCTGATGCCGGGCTTGGCCCTCGCCGATGGGCACGCCAATGTGCGCGAGCAAATCCTCG CCATTCCGGGCGTCGGCATGGGCAGCCCGACGGACGCCGATTGGCAGGCCGTCGGCGAATTGTGCCTGGGCTCCACGCGG GCGCGCTTCGCCGAGGGGGAATTTGAGGGCGTTGAGCTGACCTTCATGGGCCTCAACAACCAGAACCTGCACAATTTCCT GTTCCGCGGGTTCCTGCGGCCTTGGGAGGAATACACCGGCGCGACGATCAACTGGATCGACCTTGCGCAGGCCGATTACA ATGCGCGCCTGCAGCAATCAATCGCCACGGGCACGGTCGATTTCGACATCATCGAGATGGGCGCCCCGTTTGAGGGCGAC ACCGCTGGTCGCGGGCTGCTGGATCCGATGCCCGATTGGGTCAAGGAAGACATCGATATGGATGATTATGTCGGCTACCT ACAGGAGCCGGTGGGCACCTGGGCGGGAGAGACATATCGCGTCTCGATTGATGGCGACTGCCACAACTTCAACTACCGCA CCGACTATTTTGCCAACGAAGACTTCGCTGCGGCCTGGGCCGAGGAGGGCCATGAGGGTCCGTGGGAAGTGCCAACGACC TGGCAGAAGGTGCAGGAAGTCAGCAGCTTCCTGGCCGGAAAGGACGACCCGTTCACCGGTCTGCAGGCCCATGGCTACCT GGATCCGCTGAAGGGTTGGGGCGGCTTCGGCTTCTACTTCCTGGCCAGCCGCGCCACGGCCTACGCCAAGCACCCGGACG ATCCCGCGTGGCTCTTCGACCCCGAAGACATGACACCGCGCGTCAACAACTCAGCCTGGGTCCGGGCCATCCAGGATGTC GTGGACATCATGGACACGCAGCCCGCCGACCAGATCAACGCAGATCCCGGCACCACCGGCTTCCAACAGTTCCTGGCCGG AACCGGGTCAATGCTCAGCTGGTGGGGGGATATCGGATCGTCCGCACGCACATCGGACACGTCAGTGGTGGGTGATGTGG TGGGCTTCTCGATCCTGCCGGGATCGGATGATGTCTGGAACAGCGCCACGCAGACATGGGATGTCCTGCCCGACGGGCCG AACTTCGCACCGAACATGGCCTATATCGGGTGGGGCATCTACGTCATGGCCCGTGCTGCCGAAGGTGGAGACCTCAAGCG CAGGGCTGCGTGGTCGGCCGCGGCACATCTGGGCGGGCGTGACCTGTCGCTGTGGTGTTCCGCCTATCCGTCGGGCTTCC AGCCCTACCGCAACTCGCACTTCAATATCGATGAGTGGGAAGCAGCGGGTTATGACCGGGCGTTCATCGAGGATTACCTC GGGTCTGAGGCCGACAGCTACAACCACCCCAACGCGGCCATTGAACCCCGCATTCCCGGCATCTTCCAGTATTACTCGGT GGCCGAGGACGAGTTGGCCAAGATCTATGCCGGCGAATACGGCAGCGTGCAGGAAGGGGCCGATGCGATTGCGGCGGCCT GGGACGCGATCACCGATCAGATCGGACGCGACAGCCAGGTCGCGCTTTATCGCTCCTCGCTTGGCCTTGAATAG
Upstream 100 bases:
>100_bases GCCACTTTTCTTGTTTCACCTGCCAGAGCCGGAAGGGCCAGAACTGGGTGGCGCAAGGTGTCGCACAGCAACGTGCGAAA ACTGCCAGGGAGGAATTGAA
Downstream 100 bases:
>100_bases GCCGCACAATTGACATCCGGCGCGGCGGGATCCCCTGCCGCGCCTTCTTCTCAGCCCGGGATAAGAATGAGCCAGGATCG CCTCTACGTCGTCACAAACG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MKVELYKRLVAAQVSRRTMLKGAASVSALAASSGLMPGLALADGHANVREQILAIPGVGMGSPTDADWQAVGELCLGSTR ARFAEGEFEGVELTFMGLNNQNLHNFLFRGFLRPWEEYTGATINWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGD TAGRGLLDPMPDWVKEDIDMDDYVGYLQEPVGTWAGETYRVSIDGDCHNFNYRTDYFANEDFAAAWAEEGHEGPWEVPTT WQKVQEVSSFLAGKDDPFTGLQAHGYLDPLKGWGGFGFYFLASRATAYAKHPDDPAWLFDPEDMTPRVNNSAWVRAIQDV VDIMDTQPADQINADPGTTGFQQFLAGTGSMLSWWGDIGSSARTSDTSVVGDVVGFSILPGSDDVWNSATQTWDVLPDGP NFAPNMAYIGWGIYVMARAAEGGDLKRRAAWSAAAHLGGRDLSLWCSAYPSGFQPYRNSHFNIDEWEAAGYDRAFIEDYL GSEADSYNHPNAAIEPRIPGIFQYYSVAEDELAKIYAGEYGSVQEGADAIAAAWDAITDQIGRDSQVALYRSSLGLE
Sequences:
>Translated_557_residues MKVELYKRLVAAQVSRRTMLKGAASVSALAASSGLMPGLALADGHANVREQILAIPGVGMGSPTDADWQAVGELCLGSTR ARFAEGEFEGVELTFMGLNNQNLHNFLFRGFLRPWEEYTGATINWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGD TAGRGLLDPMPDWVKEDIDMDDYVGYLQEPVGTWAGETYRVSIDGDCHNFNYRTDYFANEDFAAAWAEEGHEGPWEVPTT WQKVQEVSSFLAGKDDPFTGLQAHGYLDPLKGWGGFGFYFLASRATAYAKHPDDPAWLFDPEDMTPRVNNSAWVRAIQDV VDIMDTQPADQINADPGTTGFQQFLAGTGSMLSWWGDIGSSARTSDTSVVGDVVGFSILPGSDDVWNSATQTWDVLPDGP NFAPNMAYIGWGIYVMARAAEGGDLKRRAAWSAAAHLGGRDLSLWCSAYPSGFQPYRNSHFNIDEWEAAGYDRAFIEDYL GSEADSYNHPNAAIEPRIPGIFQYYSVAEDELAKIYAGEYGSVQEGADAIAAAWDAITDQIGRDSQVALYRSSLGLE >Mature_557_residues MKVELYKRLVAAQVSRRTMLKGAASVSALAASSGLMPGLALADGHANVREQILAIPGVGMGSPTDADWQAVGELCLGSTR ARFAEGEFEGVELTFMGLNNQNLHNFLFRGFLRPWEEYTGATINWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGD TAGRGLLDPMPDWVKEDIDMDDYVGYLQEPVGTWAGETYRVSIDGDCHNFNYRTDYFANEDFAAAWAEEGHEGPWEVPTT WQKVQEVSSFLAGKDDPFTGLQAHGYLDPLKGWGGFGFYFLASRATAYAKHPDDPAWLFDPEDMTPRVNNSAWVRAIQDV VDIMDTQPADQINADPGTTGFQQFLAGTGSMLSWWGDIGSSARTSDTSVVGDVVGFSILPGSDDVWNSATQTWDVLPDGP NFAPNMAYIGWGIYVMARAAEGGDLKRRAAWSAAAHLGGRDLSLWCSAYPSGFQPYRNSHFNIDEWEAAGYDRAFIEDYL GSEADSYNHPNAAIEPRIPGIFQYYSVAEDELAKIYAGEYGSVQEGADAIAAAWDAITDQIGRDSQVALYRSSLGLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60952; Mature: 60952
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVELYKRLVAAQVSRRTMLKGAASVSALAASSGLMPGLALADGHANVREQILAIPGVGM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHEECCCCCC GSPTDADWQAVGELCLGSTRARFAEGEFEGVELTFMGLNNQNLHNFLFRGFLRPWEEYTG CCCCCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC ATINWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGDTAGRGLLDPMPDWVKEDIDM CEEEEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCH DDYVGYLQEPVGTWAGETYRVSIDGDCHNFNYRTDYFANEDFAAAWAEEGHEGPWEVPTT HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHH WQKVQEVSSFLAGKDDPFTGLQAHGYLDPLKGWGGFGFYFLASRATAYAKHPDDPAWLFD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEC PEDMTPRVNNSAWVRAIQDVVDIMDTQPADQINADPGTTGFQQFLAGTGSMLSWWGDIGS CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCC SARTSDTSVVGDVVGFSILPGSDDVWNSATQTWDVLPDGPNFAPNMAYIGWGIYVMARAA CCCCCCHHHHHHHHCCEECCCCCHHHCCCCCCEECCCCCCCCCCCCCHHHEEEEEEEECC EGGDLKRRAAWSAAAHLGGRDLSLWCSAYPSGFQPYRNSHFNIDEWEAAGYDRAFIEDYL CCCCHHHHHHHHHHHHCCCCCCEEHEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHH GSEADSYNHPNAAIEPRIPGIFQYYSVAEDELAKIYAGEYGSVQEGADAIAAAWDAITDQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH IGRDSQVALYRSSLGLE HCCCCEEEEEHHHCCCC >Mature Secondary Structure MKVELYKRLVAAQVSRRTMLKGAASVSALAASSGLMPGLALADGHANVREQILAIPGVGM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHEECCCCCC GSPTDADWQAVGELCLGSTRARFAEGEFEGVELTFMGLNNQNLHNFLFRGFLRPWEEYTG CCCCCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC ATINWIDLAQADYNARLQQSIATGTVDFDIIEMGAPFEGDTAGRGLLDPMPDWVKEDIDM CEEEEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCH DDYVGYLQEPVGTWAGETYRVSIDGDCHNFNYRTDYFANEDFAAAWAEEGHEGPWEVPTT HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHH WQKVQEVSSFLAGKDDPFTGLQAHGYLDPLKGWGGFGFYFLASRATAYAKHPDDPAWLFD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEC PEDMTPRVNNSAWVRAIQDVVDIMDTQPADQINADPGTTGFQQFLAGTGSMLSWWGDIGS CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCC SARTSDTSVVGDVVGFSILPGSDDVWNSATQTWDVLPDGPNFAPNMAYIGWGIYVMARAA CCCCCCHHHHHHHHCCEECCCCCHHHCCCCCCEECCCCCCCCCCCCCHHHEEEEEEEECC EGGDLKRRAAWSAAAHLGGRDLSLWCSAYPSGFQPYRNSHFNIDEWEAAGYDRAFIEDYL CCCCHHHHHHHHHHHHCCCCCCEEHEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHH GSEADSYNHPNAAIEPRIPGIFQYYSVAEDELAKIYAGEYGSVQEGADAIAAAWDAITDQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH IGRDSQVALYRSSLGLE HCCCCEEEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA