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The map label for this gene is yfiY [H]

Identifier: 89054613

GI number: 89054613

Start: 2131349

End: 2132245

Strand: Reverse

Name: yfiY [H]

Synonym: Jann_2122

Alternate gene names: 89054613

Gene position: 2132245-2131349 (Counterclockwise)

Preceding gene: 89054618

Following gene: 89054609

Centisome position: 49.38

GC content: 61.87

Gene sequence:

>897_bases
ATGCGCCTGTCAATTCTTGCAACCGTCGTCACATTGGCCCTGTCTGGGACAGCTTTCGCCGACACGATCACCCACGCCAT
GGGCGAGACGGACGTGCCCGAGGCGCCCCAGCGGATCGTCATGCTGACCAATGAGGGGACGGAAGCGTTGCTGTCGCTTG
GTCTGACCCCTGTCGGCGCAGCCAACAGCTGGACCGGCGATCCGTGGTACACCCATATCACGCCGCAGATGGACGGCGTG
GAACCGCTCGGCAACGAGACAGGCATCAACCTGGAACTCGTCGCCGCACTTGAGCCGGACCTGATCCTCGGCAACATGCA
GCGCCATGAAGAGATCTACACCCAACTCAGCGCCATTGCGCCCACTGTGATGTCGGAACGCCTGCGCGGCGATTGGCGCG
TCAATTATGCACTTTATGCAGAGGCCGTGGGCATGGCCGATGAAGGCGCCCAGATCCTCGCGGATTACGACGCGCGGGTC
GCCGAGTTGTCTGAGGCTTTGGGCGACAACCTGTCTGAGGAGGTTTCGGTGATCCGCTTTCTCGCCGCGCACATCCGTAT
CTACCAACTCGACAGTTTCTCTGGCGTGATCCTCAGCAACCTCGGCTTTGCCCGGCCCGCGATCCAGGACGTGGAAGACT
TCGCCATGCGCGTTGGCCGTGAAAGCATCCCAGATATGGACGGGGACCGGATCTTCCACTTCACCTACGATAACGGCAAC
GGAGAAGGCGAAGCCGCCGCTGAGCAGGCGCTGGTCGATCCCCTTTGGCAGGGTCTGGCCGCCGTGCAGGAAGGCCGCGT
CCATTCCGTCAGCGATGAGGCTTGGAACACCGCAGGCGGTATTCTTGCGGCGCGCCTGATGCTCGATGACATTGCACGCA
TCTATGGCGTCGAATAG

Upstream 100 bases:

>100_bases
AAGGATTGTATTTCCGGCCCGCATTCTGACCCTTGCATTTCTAACTATTTCTGTCAGCCTATTATCTGACTAAAATACTC
AACATCAAGGACGATCCGCC

Downstream 100 bases:

>100_bases
GCGCTAACTGTGCAGCCGGTCCAGCCGCAGATGATAAGGGCTGACCGTGACCTTAGCGGCAAGGGCATTGGCGGCGACGC
TCAGGCGATCAGGTGGGCGT

Product: periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRLSILATVVTLALSGTAFADTITHAMGETDVPEAPQRIVMLTNEGTEALLSLGLTPVGAANSWTGDPWYTHITPQMDGV
EPLGNETGINLELVAALEPDLILGNMQRHEEIYTQLSAIAPTVMSERLRGDWRVNYALYAEAVGMADEGAQILADYDARV
AELSEALGDNLSEEVSVIRFLAAHIRIYQLDSFSGVILSNLGFARPAIQDVEDFAMRVGRESIPDMDGDRIFHFTYDNGN
GEGEAAAEQALVDPLWQGLAAVQEGRVHSVSDEAWNTAGGILAARLMLDDIARIYGVE

Sequences:

>Translated_298_residues
MRLSILATVVTLALSGTAFADTITHAMGETDVPEAPQRIVMLTNEGTEALLSLGLTPVGAANSWTGDPWYTHITPQMDGV
EPLGNETGINLELVAALEPDLILGNMQRHEEIYTQLSAIAPTVMSERLRGDWRVNYALYAEAVGMADEGAQILADYDARV
AELSEALGDNLSEEVSVIRFLAAHIRIYQLDSFSGVILSNLGFARPAIQDVEDFAMRVGRESIPDMDGDRIFHFTYDNGN
GEGEAAAEQALVDPLWQGLAAVQEGRVHSVSDEAWNTAGGILAARLMLDDIARIYGVE
>Mature_298_residues
MRLSILATVVTLALSGTAFADTITHAMGETDVPEAPQRIVMLTNEGTEALLSLGLTPVGAANSWTGDPWYTHITPQMDGV
EPLGNETGINLELVAALEPDLILGNMQRHEEIYTQLSAIAPTVMSERLRGDWRVNYALYAEAVGMADEGAQILADYDARV
AELSEALGDNLSEEVSVIRFLAAHIRIYQLDSFSGVILSNLGFARPAIQDVEDFAMRVGRESIPDMDGDRIFHFTYDNGN
GEGEAAAEQALVDPLWQGLAAVQEGRVHSVSDEAWNTAGGILAARLMLDDIARIYGVE

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=281, Percent_Identity=25.6227758007117, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 32231; Mature: 32231

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSILATVVTLALSGTAFADTITHAMGETDVPEAPQRIVMLTNEGTEALLSLGLTPVGA
CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC
ANSWTGDPWYTHITPQMDGVEPLGNETGINLELVAALEPDLILGNMQRHEEIYTQLSAIA
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHH
PTVMSERLRGDWRVNYALYAEAVGMADEGAQILADYDARVAELSEALGDNLSEEVSVIRF
HHHHHHHHCCCEEEEHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LAAHIRIYQLDSFSGVILSNLGFARPAIQDVEDFAMRVGRESIPDMDGDRIFHFTYDNGN
HHHHHEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCEEEEEEEECCC
GEGEAAAEQALVDPLWQGLAAVQEGRVHSVSDEAWNTAGGILAARLMLDDIARIYGVE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLSILATVVTLALSGTAFADTITHAMGETDVPEAPQRIVMLTNEGTEALLSLGLTPVGA
CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC
ANSWTGDPWYTHITPQMDGVEPLGNETGINLELVAALEPDLILGNMQRHEEIYTQLSAIA
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHH
PTVMSERLRGDWRVNYALYAEAVGMADEGAQILADYDARVAELSEALGDNLSEEVSVIRF
HHHHHHHHCCCEEEEHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LAAHIRIYQLDSFSGVILSNLGFARPAIQDVEDFAMRVGRESIPDMDGDRIFHFTYDNGN
HHHHHEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCEEEEEEEECCC
GEGEAAAEQALVDPLWQGLAAVQEGRVHSVSDEAWNTAGGILAARLMLDDIARIYGVE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]