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The map label for this gene is amyD [H]

Identifier: 89054608

GI number: 89054608

Start: 2125398

End: 2126495

Strand: Reverse

Name: amyD [H]

Synonym: Jann_2117

Alternate gene names: 89054608

Gene position: 2126495-2125398 (Counterclockwise)

Preceding gene: 89054609

Following gene: 89054607

Centisome position: 49.25

GC content: 60.2

Gene sequence:

>1098_bases
ATGAGCCAGGATCGCCTCTACGTCGTCACAAACGACCAGATCACACCGGGGCGCGTCCGGGTCGGGACCGTGATGATCTG
GGCCTCTTTCGCACTTCTGGTGGTCATCGCCACCTGGCAGGTCCTGGGTGGCTACGACCTGACCTACGACTTCTCCAACT
GGCGCCCGACCCTCTATGCGTACCTGTTTTTCGTCACCTGCTATTGCATGGCTCTGGTCGTGCGCCATGGCGAGCAGGGC
AAGCGGCGTCTCTTCATCGTGCCGGCGACCATTTTCGTTCTGTCCATGGTGTTCATCCCGCTGGTCTTCGGCCTCAGCAT
CGCGTTTTCGGACTGGAACCTCAGCTCCGTCAGCGGCCAGCAATACAACGGTTTCGACAATATCAGGCAGATGTGGCAGG
ACGATTTCTACTGGAACGCGCTGACCAATATGCTCTGGTATACGCTGGCGATCATCGTCGAATACGTCATCGCCTTTGGC
CTGGCATTGCTGCTCAACAGTCAGATCCGGGCGCGCAAGTTCTTCCGCGTCGCTTTCCTGCTGCCCCTGATGCTGTCGCC
GGTCGCCGTGTCGTGGATGGTCGGCAAGTCCATGTTGGAGGCCCGCTTCGGCCCCATCGCCCGGCTCGCGCGGACGCTTG
GCATCGACAATCCCAGCTTCTTTGGCGACGCGGAAACCGCCCGCGCGATGATCATGATCATGGATGCCTGGACCTTCATC
CCCTTCATGATGATCATGCTTCTGGCGGGCCTTCAGTCGATCCCGAAAGACATCCAGGAGGCCGCCCGCGTCGATGGCGC
GACGCCGTGGCAGAATTTCAGGGAGGTCACGTTTCCCCTGATGCTGCCGGTGTCGATCACGGCGATCATGATCCGCATCA
TCTTCAAACTGAAGCTGGCCGACATTATCATCAACGTGACGTCCGGCGGGCCCGGCGGGGCGACGGACTCGGTCACGTCG
TTCATCTTTCGCGAATACCGCGACCGCTCCAACGTGGGCTACGGCACGATGCTCGCCATGGTCTATCTGGTGTTCATCGT
CATCGGCTTCACCCTGTTCCTGAAACTCGCGGCCCGCTGGATGCGGCCGAAATACTGA

Upstream 100 bases:

>100_bases
CGCGCTTTATCGCTCCTCGCTTGGCCTTGAATAGGCCGCACAATTGACATCCGGCGCGGCGGGATCCCCTGCCGCGCCTT
CTTCTCAGCCCGGGATAAGA

Downstream 100 bases:

>100_bases
GGGTGCCATGAGCCAGACGCAAATCTTCCACGATCACGAGGCCGATCTTGGCCACAAGGTGAAGTGGTATGCCAAGCGCG
TCACCGTTTACGGCATTTTG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSQDRLYVVTNDQITPGRVRVGTVMIWASFALLVVIATWQVLGGYDLTYDFSNWRPTLYAYLFFVTCYCMALVVRHGEQG
KRRLFIVPATIFVLSMVFIPLVFGLSIAFSDWNLSSVSGQQYNGFDNIRQMWQDDFYWNALTNMLWYTLAIIVEYVIAFG
LALLLNSQIRARKFFRVAFLLPLMLSPVAVSWMVGKSMLEARFGPIARLARTLGIDNPSFFGDAETARAMIMIMDAWTFI
PFMMIMLLAGLQSIPKDIQEAARVDGATPWQNFREVTFPLMLPVSITAIMIRIIFKLKLADIIINVTSGGPGGATDSVTS
FIFREYRDRSNVGYGTMLAMVYLVFIVIGFTLFLKLAARWMRPKY

Sequences:

>Translated_365_residues
MSQDRLYVVTNDQITPGRVRVGTVMIWASFALLVVIATWQVLGGYDLTYDFSNWRPTLYAYLFFVTCYCMALVVRHGEQG
KRRLFIVPATIFVLSMVFIPLVFGLSIAFSDWNLSSVSGQQYNGFDNIRQMWQDDFYWNALTNMLWYTLAIIVEYVIAFG
LALLLNSQIRARKFFRVAFLLPLMLSPVAVSWMVGKSMLEARFGPIARLARTLGIDNPSFFGDAETARAMIMIMDAWTFI
PFMMIMLLAGLQSIPKDIQEAARVDGATPWQNFREVTFPLMLPVSITAIMIRIIFKLKLADIIINVTSGGPGGATDSVTS
FIFREYRDRSNVGYGTMLAMVYLVFIVIGFTLFLKLAARWMRPKY
>Mature_364_residues
SQDRLYVVTNDQITPGRVRVGTVMIWASFALLVVIATWQVLGGYDLTYDFSNWRPTLYAYLFFVTCYCMALVVRHGEQGK
RRLFIVPATIFVLSMVFIPLVFGLSIAFSDWNLSSVSGQQYNGFDNIRQMWQDDFYWNALTNMLWYTLAIIVEYVIAFGL
ALLLNSQIRARKFFRVAFLLPLMLSPVAVSWMVGKSMLEARFGPIARLARTLGIDNPSFFGDAETARAMIMIMDAWTFIP
FMMIMLLAGLQSIPKDIQEAARVDGATPWQNFREVTFPLMLPVSITAIMIRIIFKLKLADIIINVTSGGPGGATDSVTSF
IFREYRDRSNVGYGTMLAMVYLVFIVIGFTLFLKLAARWMRPKY

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=26.8482490272374, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787570, Length=237, Percent_Identity=27.0042194092827, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789861, Length=212, Percent_Identity=25.9433962264151, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41541; Mature: 41410

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDRLYVVTNDQITPGRVRVGTVMIWASFALLVVIATWQVLGGYDLTYDFSNWRPTLYA
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
YLFFVTCYCMALVVRHGEQGKRRLFIVPATIFVLSMVFIPLVFGLSIAFSDWNLSSVSGQ
HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
QYNGFDNIRQMWQDDFYWNALTNMLWYTLAIIVEYVIAFGLALLLNSQIRARKFFRVAFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LPLMLSPVAVSWMVGKSMLEARFGPIARLARTLGIDNPSFFGDAETARAMIMIMDAWTFI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
PFMMIMLLAGLQSIPKDIQEAARVDGATPWQNFREVTFPLMLPVSITAIMIRIIFKLKLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIIINVTSGGPGGATDSVTSFIFREYRDRSNVGYGTMLAMVYLVFIVIGFTLFLKLAARW
HHEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRPKY
HCCCC
>Mature Secondary Structure 
SQDRLYVVTNDQITPGRVRVGTVMIWASFALLVVIATWQVLGGYDLTYDFSNWRPTLYA
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH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HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]